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l



Aquaculture Journals


Table of Contents


July

2010


Animal Feed Science and Technology

*

Antimicrobial Agents and Chemotherapy

Applied and Environmental Microbiology

Appl
ied Microbiology and Biotechnology

Aquaculture

*

Aquaculture Economics & Management

Aquacultural Engineering

*

Aquaculture International

*

Aquaculture Nutrition

*

Aquaculture Research

*

Aquatic Living Resources

Asian Fisheries Science

Bulletin of the European Association of Fish Pathologists

Canadian Journal of Fisheries and Aquatic Sciences

*

Curr
ent Opinion in Microbiology

*

Diseases of Aquatic Organisms

*

Fish & Shellfish Immunology

*

Fisheries Science

*

Hydrobiologia

*

Journal of Applied Ichthyology

*

Journal of Applied Microbiology

*

Journal of Applied Phycology

Journal of Aquatic Animal Health

Journal of Experimental Marine Biology and Ecology *

Journal of Fish Biology

Journal of Fish Diseases

*

Journal of Invertebrate Pathology
*

Journal of Microbial Ecology
*



Aquaculture Journals

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2

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97



* full text available

Journal of Microbiological Methods

Journal of Ocean University of China

Journal of Shellfish Research

Journal of the World Aquaculture Society

Letters in Applied Microbiology

*

Marine Biology *

Marine Biotechnology

*

Nippon Suisan Gakkaishi

North American Journal of Aquaculture

Reviews in Aquaculture

Trends in Biotechnology

*

Trends in Microbiology

*




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V
OLUME

159,

PART

1
-
2
,

J
ULY

2010

Website


Ruminants



Effects of dietary tannin source on performance, feed efficiency, ruminal fermentation,
and carcass and non
-
carcass traits in steers fed a high
-
grain diet

Pages 1
-
9

W.K. Krueger, H. Gutierrez
-
Bañuelos, G.E. Carstens, B.R. Min, W.E. Pincha
k, R.R. Gomez,
R.C. Anderson, N.A. Krueger, T.D.A. Forbes


Preview



PDF (231 K)

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Effects of processed cowpea (
Vigna unguiculata

L. Wa
lp) haulms as a feed supplement
on voluntary intake, utilization and blood profile of West African dwarf sheep fed a
basal diet of
Pennisetum purpureum

in the dry season

Pages 10
-
17

U.Y. Anele, O.M. Arigbede, K.
-
H. Südekum, K.A. Ike, A.O. Oni, J.A. Olanit
e, G.A. Amole,
P.A. Dele, A.O. Jolaosho


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Yucca schidigera extract decreases
in vitro

methane production in a va
riety of forages
and diets

Pages 18
-
26

M. Xu, M. Rinker, K.R. McLeod, D.L. Harmon


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Effects of feeding corn nat
urally contaminated with
Fusarium

mycotoxins and/or a
modified yeast cell wall extract on the performance, immunity and carcass
characteristics of grain
-
fed veal calves

Pages 27
-
34

L.M. Martin, K.M. Wood, P.L. McEwen, T.K. Smith, I.B. Mandell, A. Yannikou
ris, K.C.
Swanson


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Ruminal biohydrogenation of unsaturated fatty acids
in vitro

as affected by chitosan

Pages
35
-
40

I. Goiri, G. Indurain, K. Insausti, V. Sarries, A. Garcia
-
Rodriguez


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Non
-
ruminants


Fermentation of soybe
an meal and its inclusion in diets for newly weaned pigs
reduced diarrhea and measures of immunoreactivity in the plasma

Pages 41
-
49

Y.S. Song, V.G. Pérez, J.E. Pettigrew, C. Martinez
-
Villaluenga, E. Gonzalez de Mejia


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Influence of some potential prebiotics and fibre
-
rich foodstuffs on composition and
activity of canine intestinal microbiota

Pages 50
-
58



Aquaculture Journals

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4

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97



Giacomo B
iagi, Irene Cipollini, Monica Grandi, Giuliano Zaghini


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Effects of β
-
mannanase expressed by
Pichia pastoris

in corn

soybean meal diets on
broiler performance, nutrient digestibility, energy utilization and immunoglobulin
levels

Pages 59
-
67

Yihang Li, Xiang Chen, Yiqun Chen, Zhimin Li, Yunhe Cao


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Articles




Short communications


A preliminary study on the length of incubation needed to maximize guanidination of
lysine in distille
rs dried grains with solubles (DDGS) and in pig ileal digesta

Pages 68
-
71

A.A. Pahm, C. Pedersen, D. Simon, H.H. Stein


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Fractionation of soybean meal, cottonseed meal and wheat middlings using
combination of sieving and air classification

Pages 72
-
78

Ravi Challa, Radhakrishnan Srinivasan, Filip To


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Book review


Society of Nutrition Physiology, Editor, Proceedings of the Society of Nutrition
Physiology, vol. 19, DLG
-
Verlag Frankfurt (Main) (2010) ISBN 978
-
3
-
7690
-
4103
-
3

190
pp., Price: 29,90€ plus postage, Softcover.

Page 79

Gerhard Flachowsky


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VOLUME

54,

PART

7
,

J
ULY

2010

Website


No new issue available



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VOLUME

76,

PART

13
,

J
ULY

2010

Website


Research articles


Biotechnology



Enhancement of Survival and Electricity Production in an Engineered Bacterium by
Light
-
Driven Proton Pumping


Ethan T. Johnson, Daniel B. Baron, Belé
n Naranjo, Daniel R. Bond, Claudia Schmidt
-
Dannert, and Jeffrey A. Gralnick


Appl. Environ. Microbiol. July 2010 76: 4123
-
4129; published ahead of print May 7, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and
Permissions]





Adaptive Evolution of
Escherichia coli

K
-
12 MG1655 during Growth on a Nonnative
Carbon Source, L
-
1,2
-
Propanediol


Dae
-
Hee Lee and Bernhard Ø. Palsson


Appl. Environ. Microbiol. July 2010 76: 4158
-
4168; published ahead of print April 30, 2
010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Escherichia coli

Strains Engineered for Homofermentative Production of D
-
Lactic Acid
from Glycerol


Suman Mazumdar, James M. Clomburg, and Ramo
n Gonzalez


Appl. Environ. Microbiol. July 2010 76: 4327
-
4336; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Metabolic Engineering of
Gluconobacter oxydans

for Improved Growth Rate and
Growth Yield on Glucose by Elimination of Gluconate Formation


Vera Krajewski, Petra
Simic, Nigel J. Mouncey, Stephanie Bringer, Hermann Sahm, and
Michael Bott


Appl. Environ. Microbiol. July 2010 76: 4369
-
4376; published ahead of print May 7, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Combined Use of Fluorescent Dyes and Flow Cytome
try To Quantify the Physiological
State of
Pichia pastoris

during the Production of Heterologous Proteins in High
-
Cell
-
Density Fed
-
Batch Cultures


Petr Hyka, Thomas Züllig, Claudia Ruth, Verena Looser, Christian Meier, Joachim Klein,
Karel Melzoch, Hans
-
Pe
ter Meyer, Anton Glieder, and Karin Kovar


Appl. Environ. Microbiol. July 2010 76: 4486
-
4496; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]

OPEN ACCESS





Pil
ot
-
Scale Production of Fatty Acid Ethyl Esters by an Engineered
Escherichia coli

Strain Harboring the p(Microdiesel) Plasmid


Yasser Elbahloul and Alexander Steinbüchel


Appl. Environ. Microbiol. July 2010 76: 4560
-
4565; published ahead of print May 7, 201
0,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Invertebrate Microbiology



Phylogenetic Position and Peculiar Genetic Traits of a Midgut Bacterial Symbiont of
the Stinkbug
Parastrachia japonensis


Takahiro Hosokawa, Yoshitomo Kikuchi, Naruo Nikoh, Xian
-
Ying Me
ng, Mantaro Hironaka,
and Takema Fukatsu


Appl. Environ. Microbiol. July 2010 76: 4130
-
4135; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]







Aquaculture Journals

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7

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97



Ecologic
al Factors Characterizing the Prevalence of Bacterial Tick
-
Borne Pathogens in
Ixodes ricinus

Ticks in Pastures and Woodlands


Lénaïg Halos, Séverine Bord, Violaine Cotté, Patrick Gasqui, David Abrial, Jacques
Barnouin, Henri
-
Jean Boulouis, Muriel Vayssier
-
Taussat, and Gwenaël Vourc'h


Appl. Environ. Microbiol. July 2010 76: 4413
-
4420; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Methods



New Device for High
-
Throughput Viability Screening of Flow Biofilms


Michael R. Benoit, Carolyn G. Conant, Cristian Ionescu
-
Zanetti, Michael Schwartz, and A.
Matin


Appl. Environ. Microbiol. July 2010 76: 4136
-
4142; published ahead of print April 30, 201
0,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Rapid Affinity Immunochromatography Column
-
Based Tests for Sensitive Detection of
Clostridium botulinum

Neurotoxins and
Escherichia coli

O157


Jason Brunt, Martin D. Webb, and Michael W. Peck


Appl. Environ. Microbiol. July 2010 76: 4143
-
4150; published ahead of print April 30, 2010,

[Abstract]

[Full Text]

[PDF]

[
Reprints and Permissions]





Use of Propidium Monoazide in Reverse Transcriptase PCR To Distinguish between
Infectious and Noninfectious Enteric Viruses in Water Samples


Sandhya Parshionikar, Ian Laseke, and G. Shay Fout


Appl. Environ. Microbiol. July
2010 76: 4318
-
4326; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Highly Discriminatory Single
-
Nucleotide Polymorphism Interrogation of
Escherichia
coli

by Use of Allele
-
Specific Real
-
Time PCR and eBURST Anal
ysis


Maxim S. Sheludchenko, Flavia Huygens, and Megan H. Hargreaves


Appl. Environ. Microbiol. July 2010 76: 4337
-
4345; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Pentaplexed Quantitative Real
-
Time PCR Assay for the Simultaneous Detection and
Quantification of Botulinum Neurotoxin
-
Producing Clostridia in Food and Clinical
Samples


Sebastian Kirchner, K. Me
lanie Krämer, Martin Schulze, Diana Pauly, Daniela Jacob, Frank
Gessler, Andreas Nitsche, Brigitte G. Dorner, and Martin B. Dorner


Appl. Environ. Microbiol. July 2010 76: 4387
-
4395; published ahead of print April 30, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Fluorescence
In Situ

Hybridization Method Using a Peptide Nucleic Acid Probe for
Identification of
Salmonella

spp. in a Broad Spectrum of Samples


C. Almeida, N. F. Azevedo, R. M. Fernandes, C. W. Keev
il, and M. J. Vieira


Appl. Environ. Microbiol. July 2010 76: 4476
-
4485; published ahead of print May 7, 2010,

[Abstract]

[Ful
l Text]

[PDF]

[Reprints and Permissions]





Application of Whole
-
Cell Matrix
-
Assisted Laser Desorption Ionization
-
Time of Flight
Mass

Spectrometry for Rapid Identification and Clustering Analysis of
Pantoea

Species


Fabio Rezzonico, Guido Vogel, Brion Duffy, and Mauro Tonolla


Appl. Environ. Microbiol. July 2010 76: 4497
-
4509; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Random Mutagenesis of
Clostridium cellulolyticum

by Using a Tn
1545

Derivative


Jean
-
Charles Blouzard, Odil
e Valette, Chantal Tardif, and Pascale de Philip


Appl. Environ. Microbiol. July 2010 76: 4546
-
4549; published ahead of print April 30, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]






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Improvement of the Representation of Bifidobacteria in Fecal Microbiota Metagenomic
Libraries by Application of the
cpn60

Universal Pr
imer Cocktail


Janet E. Hill, W. M. Ursla Fernando, Gordon A. Zello, Robert T. Tyler, Wendy J. Dahl, and
Andrew G. Van Kessel


Appl. Environ. Microbiol. July 2010 76: 4550
-
4552; published ahead of print April 30, 2010,

[Abstract]

[Full Text]

[PDF]

[R
eprints and Permissions]





Dual Reporter System for
In Situ

Detection of Plasmid Transfer under Aerobic and
Anaerobic Conditions


Jaroslaw E. Król, Linda M. Rogers, Stephen M. Krone, and Eva M. Top


Appl. Environ. Microbiol. July 2010 76: 4553
-
4556; pub
lished ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Practical Method for Extraction of PCR
-
Quality DNA from Environmental Soil Samples


Kelly A. Fitzpatrick, Gilbert J. Kersh, an
d Robert F. Massung


Appl. Environ. Microbiol. July 2010 76: 4571
-
4573; published ahead of print April 30, 2010,

[Abstract]

[F
ull Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Assessing the Potential of an Induced
-
Mutation Strategy for Aver
mectin
Overproducers


Hong Gao, Mei Liu, Ying Zhuo, Xianlong Zhou, Jintao Liu, Difei Chen, Wenquan Zhang,
Zhongxuan Gou, Peng Shang, and Lixin Zhang


Appl. Environ. Microbiol. July 2010 76: 4583
-
4586; published ahead of print May 7, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Physiology



Disruption of the Putative Cell Surface

Polysaccharide Biosynthesis Gene SO3177 in
Shewanella oneidensis

MR
-
1 Enhances Adhesion to Electrodes and Current
Generation in Microbial Fuel Cells


Atsushi Kouzuma, Xian
-
Ying Meng, Nobutada Kimura, Kazuhito Hashimoto, and Kazuya
Watanabe


Appl. Environ.

Microbiol. July 2010 76: 4151
-
4157; published ahead of print May 7, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints an
d Permissions]





Expression of
Xylella fastidiosa

Fimbrial and Afimbrial Proteins during Biofilm
Formation


R. Caserta, M. A. Takita, M. L. Targon, L. K. Rosselli
-
Murai, A. P. de Souza, L. Peroni, D. R.
Stach
-
Machado, A. Andrade, C. A. Labate, E. W. Kit
ajima, M. A. Machado, and A. A. de
Souza


Appl. Environ. Microbiol. July 2010 76: 4250
-
4259; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Hydrogen Production by the Unicellular, Diazotrophic Cyanobacterium
Cyanothece

sp.
Strain ATCC 51142 under Conditions of Continuous Light


Hon
gtao Min and Louis A. Sherman


Appl. Environ. Microbiol. July 2010 76: 4293
-
4301; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Regulation of Neurotoxin Production and Sporulation by a Putative
agrBD

Signaling
System in P
roteolytic
Clostridium botulinum


Clare M. Cooksley, Ian J. Davis, Klaus Winzer, Weng C. Chan, Michael W. Peck, and Nigel
P. Minton


Appl. Environ. Microbiol. July 2010 76: 4448
-
4460; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]







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-
Glutamylmethylamide Is an Essential Intermediate in the Metabolism of Methylamine
by
Methylocella silvestris


Yin Chen, Julie Scanlan, Lijiang Song, Andrew Crombie, M. Tanvir Rahma
n, Hendrik
Schäfer, and J. Colin Murrell


Appl. Environ. Microbiol. July 2010 76: 4530
-
4537; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]








Public Health Microbiology



Regrowth of Potential Opportunistic Pathogens and Algae in Reclaimed
-
Water
Di
stribution Systems


Patrick K. Jjemba, Lauren A. Weinrich, Wei Cheng, Eugenio Giraldo, and Mark W.
LeChevallier


Appl. Environ. Microbiol. July 2010 76: 4169
-
4178; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





The Cyclic AMP (cAMP)
-
cAMP Receptor Protein Signaling

System Mediates Resistance
of
Vibrio cholerae

O1 Strains to Multiple Environmental Bacteriophages


M. Shamim Hasan Zahid, T. M. Zaved Waise, M. Kamruzzaman, Amar N. Ghosh, G.
Balakrish Nair, John J. Mekalanos, and Shah M. Faruque


Appl. Environ. Microbiol
. July 2010 76: 4233
-
4240; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





High
-
Throughput Procedure for Tick Surveys of Tick
-
Borne Encephalitis Virus and Its
Application in a National Survei
llance Study in Switzerland


Rahel Gäumann, Kathrin Mühlemann, Marc Strasser, and Christian M. Beuret


Appl. Environ. Microbiol. July 2010 76: 4241
-
4249; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Veroto
xin 2 Enhances Adherence of Enterohemorrhagic
Escherichia coli

O157:H7 to
Intestinal Epithelial Cells and

Expression of β1
-
Integrin by IPEC
-
J2 Cells


Bianfang Liu, Xianhua Yin, Yanni Feng, James R. Chambers, Aiguang Guo, Joshua Gong,
Jing Zhu, and Carlton L. Gyles


Appl. Environ. Microbiol. July 2010 76: 4461
-
4468; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Presence of
Coxiella burnetii

DNA in the Environment of the United States, 2006 to
2008


Gilbert J. Kersh, Teresa M. Wolfe, Kelly A. Fitzpatrick, Amanda J. Candee, Lindsay D. Oliver,
Nic
ole E. Patterson, Joshua S. Self, Rachael A. Priestley, Amanda D. Loftis, and Robert F.
Massung


Appl. Environ. Microbiol. July 2010 76: 4469
-
4475; published ahead of print May 14, 2010,

[A
bstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Terrestrial Small Mammals as Reservoirs of
Mycobacterium ulcerans

in Ben
in


Lies Durnez, Patrick Suykerbuyk, Violaine Nicolas, Patrick Barrière, Erik Verheyen, Christian
R. Johnson, Herwig Leirs, and Françoise Portaels


Appl. Environ. Microbiol. July 2010 76: 4574
-
4577; published ahead of print April 30, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Environmental Microbiology



Adsorption of Extrace
llular Chromosomal DNA and Its Effects on Natural
Transformation of
Azotobacter vinelandii




Aquaculture Journals

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10

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97



Nanxi Lu, Julie L. Zilles, and Thanh H. Nguyen


Appl. Environ. Microbiol. July 2010 76: 4179
-
4184; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Metagenomic Analysis

of Apple Orchard Soil Reveals Antibiotic Resistance Genes
Encoding Predicted Bifunctional Proteins


Justin J. Donato, Luke A. Moe, Brandon J. Converse, Keith D. Smart, Flora C. Berklein,
Patricia S. McManus, and Jo Handelsman


Appl. Environ. Microbiol. Ju
ly 2010 76: 4396
-
4401; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]








Plant Microbiology



Disruption of the Glycine Cleavage System Enables
Sinorhizobium fredii

USDA257 To
Form Nitrogen
-
Fixing Nodules on Agronomically Improved North America
n Soybean
Cultivars


Julio C. Lorio, Won
-
Seok Kim, Ammulu H. Krishnan, and Hari B. Krishnan


Appl. Environ. Microbiol. July 2010 76: 4185
-
4193; published ahead of print May 7, 2010,

[Abstra
ct]

[Full Text]

[PDF]

[Reprints and Perm
issions]





Characterization of the NifA
-
RpoN Regulon in
Rhizobium etli

in Free Life and in
Symbiosis with
Phaseolus vulgaris


Emmanuel Salazar, J. Javier Díaz
-
Mejía, Gabriel Moreno
-
Hagelsieb, Gabriel Martínez
-
Batallar, Yolanda Mora, Jaime Mora, and Serg
io Encarnación


Appl. Environ. Microbiol. July 2010 76: 4510
-
4520; published ahead of print May 7, 2010,

[Abstract]

[Full Text
]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Burkholderia phymatum

Strains Capabl
e of Nodulating
Phaseolus vulgaris

Are Present
in Moroccan Soils


C. Talbi, M. J. Delgado, L. Girard, A. Ramírez
-
Trujillo, J. Caballero
-
Mellado, and E. J.
Bedmar


Appl. Environ. Microbiol. July 2010 76: 4587
-
4591; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Microbial Ec
ology



Increase in Acid Tolerance of
Campylobacter jejuni

through Coincubation with
Amoebae


Diana Axelsson
-
Olsson, Lovisa Svensson, Jenny Olofsson, Paulo Salomon, Jonas
Waldenström, Patrik Ellström, and Björn Olsen


Appl. Environ. Microbiol. July 2010 76
: 4194
-
4200; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Microbial Community Structure and Denitrification in a Wetland Mitigation Bank


Ariane L. Peralta, Jeffrey W. Matthews, and Angela D. Kent


Appl. Environ. Microbiol. July 2010 76: 4207
-
4215; published ahead of print May 7, 2
010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Production of Indol
e from L
-
Tryptophan and Effects of These Compounds on Biofilm
Formation by
Fusobacterium nucleatum

ATCC 25586


Takako Sasaki
-
Imamura, Akira Yano, and Yasuo Yoshida


Appl. Environ. Microbiol. July 2010 76: 4260
-
4268; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]







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Biosynthetic Potential of Phylogenetically Unique Endophytic Actinomycetes from
Tropical Plants


Jeffrey E. Janso and Guy T. Carter


Appl. Environ. Microbiol. July 2010 76: 4377
-
4386; published ahead of print May 14,

2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





RNA
-
Based Investigation of Ammonia
-
Oxidizing Archaea in Hot Springs of Yunnan
Province, China


Hongchen Jiang, Qiuyuan Huang, Hailiang Dong, Peng Wang, Fengping Wang,
Wenjun Li,
and Chuanlun Zhang


Appl. Environ. Microbiol. July 2010 76: 4538
-
4541; published ahead of print April 30, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Genetics and Molecular Biology



Cloning and Character
ization of a Gene Cluster for Hatomarubigin Biosynthesis in
Streptomyces

sp. Strain 2238
-
SVT4


Takashi Kawasaki, Reiko Hirashima, Tomoka Maruta, Haruka Sato, Ayumi Maeda, Yuki
Yamada, Maho Takeda, and Yoichi Hayakawa


Appl. Environ. Microbiol. July 2010 76
: 4201
-
4206; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Secretion of an Endogenous Subtilisin by
Pichia pastoris

Strains GS115 and KM71


Karine Salamin, Dev Sriranganadane, Barbara Léchenne, Olivier Jousson, and Michel
Monod


Appl. Environ. Mi
crobiol. July 2010 76: 4269
-
4276; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Commonalities and Differences in Regulation of
N
-
Acyl Homoserine Lactone Quorum
Sensing in the Beneficial Plant
-
Associated
Burkholderia

Species Cluster


Zulma Rocío Suárez
-
Moreno, Giulia Devescovi, Mike Myers, L
etícia Hallack, Lucia
Mendonça
-
Previato, Jesús Caballero
-
Mellado, and Vittorio Venturi


Appl. Environ. Microbiol. July 2010 76: 4302
-
4317; published ahead of print April 30, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Fluorescent Reporters for Studies of Cellular Localization of Proteins in
Staphylococcus aureus


Pedro M. Pereira, Helena Veiga, Ana M. Jorge, and Mariana G. Pinho


Appl
. Environ. Microbiol. July 2010 76: 4346
-
4353; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





NtcA from
Microcystis aeruginosa

PCC 7806 Is Autoregulatory and Binds to the
Microcystin Promoter


H. P. Ginn, L. A. Pearson, and B. A. Neilan


Appl. Environ. Microbiol. Jul
y 2010 76: 4362
-
4368; published ahead of print May 7, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Gene Expression in Proliferating Cells of the Dinoflagellate
Alexandrium catenella

(Dinophyceae)


Eve Toulza, Mi
-
Sun Shin, Guillaume Blanc, Stéphane Audic, Mohamed Laabir, Yves Collos,
Jean
-
Michel Claver
ie, and Daniel Grzebyk


Appl. Environ. Microbiol. July 2010 76: 4521
-
4529; published ahead of print April 30, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Enterocin X, a Novel Two
-
Peptide Bacteriocin from
Enterococcus fa
ecium

KU
-
B5, Has
an Antibacterial Spectrum Entirely Different from Those of Its Component Peptides


Chih
-
Bo Hu, Wanna Malaphan, Takeshi Zendo, Jiro Nakayama, and Kenji Sonomoto




Aquaculture Journals

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12

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97



Appl. Environ. Microbiol. July 2010 76: 4542
-
4545; published ahead of print Ap
ril 23, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Food Microbiology



Listeria monocytogenes

B

Has a Small Core Regulon and a Conserved Role in
Vi
rulence but Makes Differential Contributions to Stress Tolerance across a Diverse
Collection of Strains


H. F. Oliver, R. H. Orsi, M. Wiedmann, and K. J. Boor


Appl. Environ. Microbiol. July 2010 76: 4216
-
4232; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Improvement of Multiple
-
Stress Tolerance and Lactic Acid Pr
oduction in
Lactococcus
lactis

NZ9000 under Conditions of Thermal Stress by Heterologous Expression of
Escherichia coli dnaK


Abdullah
-
Al
-
Mahin, Shinya Sugimoto, Chihana Higashi, Shunsuke Matsumoto, and Kenji
Sonomoto


Appl. Environ. Microbiol. July 2010 7
6: 4277
-
4285; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Quantification of the Effect of Culturing Temperature on Salt
-
Induced Heat Resistance
of
Bacill
us

Species


Heidy M. W. den Besten, Eric
-
Jan van der Mark, Lonneke Hensen, Tjakko Abee, and Marcel
H. Zwietering


Appl. Environ. Microbiol. July 2010 76: 4286
-
4292; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Evaluation of a Stochastic
Inactivation Model for Heat
-
Activated Spores of
Bacillus

spp.


Maria G. Corradini, Mark D. Normand, Murray Eisenberg, and Micha Peleg


Appl. Environ.
Microbiol. July 2010 76: 4402
-
4412; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Enhanced Surface Colonization by
Escherichia c
oli

O157:H7 in Biofilms Formed by an
Acinetobacter calcoaceticus

Isolate from Meat
-
Processing Environments


Olivier Habimana, Even Heir, Solveig Langsrud, Anette Wold Åsli, and Trond Møretrø


Appl. Environ. Microbiol. July 2010 76: 4557
-
4559; published ahe
ad of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Enzymology and Protein Engineering



Domains III and I
-
2
, at the Entrance of the Binding Cleft, Play an Important Role in
Cold Adaptation of the Periplasmic Dipeptide
-
Binding Protein (DppA) from the Deep
-
Sea Psychrophilic Bacterium
Pseudoalteromonas

sp. Strain SM
9913


Wei
-
Xin Zhang, Bin
-
Bin Xie, Xiu
-
Lan Chen, Sheng Dong, Xi
-
Ying Zhang, Bai
-
Cheng Zhou,
and Yu
-
Zhong Zhang


Appl. Environ. Microbiol. July 2010 76: 4354
-
4361; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Inactivation and Augmentation of the Primary

3
-
Ketosteroid
-
1
-

Dehydrogenase in
Mycobacterium neoaurum

NwIB
-
01: Biotransformation of Soybean Phytosterols to 4
-
Androstene
-

3,17
-
Dione or 1,4
-
Androstadiene
-
3,17
-
Dione


Wei Wei, Feng
-
qing Wang, Shu
-
yue Fan, and Dong
-
zhi Wei


Appl. Environ. Microbiol. July 2010 76: 4578
-
4582; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Mycology





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13

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Shotgun Proteomics of
Aspergillus niger

Microsomes upon D
-
Xylose Induction


José Miguel P. Ferreira de Oliveira, Mark W. J. van Passel, Peter J. Schaap
, and Leo H. de
Graaff


Appl. Environ. Microbiol. July 2010 76: 4421
-
4429; published ahead of print May 7, 2010,
[Abstract]

[Fu
ll Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Comparison of Different DNA
-
Based Methods for Molecular

Typing of
Histoplasma
capsulatum


Mauro de Medeiros Muniz, Patrícia Morais e Silva Tavares, Wieland Meyer, Joshua Daniel
Nosanchuk, and Rosely Maria Zancope
-
Oliveira


Appl. Environ. Microbiol. July 2010 76: 4438
-
4447; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permiss
ions]





Biodegradation



Influence of Low Oxygen Tensions and Sorption to Sediment Black Carbon on
Biodegradation of Pyrene


José
-
Julio Ortega
-
Calvo and Philip M. Gschwend


Appl. Environ. Microbiol. July 2010 76: 4430
-
4437; published ahead of print May
14, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints

and Permissions]





Geomicrobiology



Population Structure and Abundance of Arsenite
-
Oxidizing Bacteria along an Arsenic
Pollution Gradient in Waters of the Upper Isle River Basin, France


Marianne Quéméneur, Aurélie Cébron, Patrick Billard, Fabienne Ba
ttaglia
-
Brunet, Francis
Garrido, Corinne Leyval, and Catherine Joulian


Appl. Environ. Microbiol. July 2010 76: 4566
-
4570; published ahead of print May 7, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]



Previous



Top



Next


VOLUME

76,

PART

14,

J
ULY
2010

Website


Research articles


Plant Microbiology



Genetic and Metabolic Divergence within a
Rhizobium leguminosarum

bv.
trifolii

Populatio
n Recovered from Clover Nodules


Jerzy Wielbo, Monika Marek
-
Kozaczuk, Andrzej Mazur, Agnieszka Kubik
-
Komar, and Anna
Skorupska


Appl. Environ. Microbiol. July 2010 76: 4593
-
4600; published ahead of print May 14, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplement
al material]

[Reprints and Permissions]





Improvement of Phosphate Solubilization and
Medicago

Plant Yield by an Indole
-
3
-
Acetic Acid
-
Overproducing Strain of
Sinorhizobium meliloti


Carmen Bianco and Roberto Defez


Appl. Environ
. Microbiol. July 2010 76: 4626
-
4632; published ahead of print May 28, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Comparison of Barley Succession and Take
-
All Disea
se as Environmental Factors
Shaping the Rhizobacterial Community during Take
-
All Decline


Karin Schreiner, Alexandra Hagn, Martina Kyselková, Yvan Moënne
-
Loccoz, Gerhard Welzl,
Jean Charles Munch, and Michael Schloter


Appl. Environ. Microbiol. July 2010 7
6: 4703
-
4712; published ahead of print June 4, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]







Aquaculture Journals

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14

of
97



Food Microbiology



Pork Contaminated with
Salmonella

enterica

Serovar 4,[5],12:i:

, an Emerging Health
Risk for Humans


Elisabeth Hauser, Erhard Tietze, Rei
ner Helmuth, Ernst Junker, Kathrin Blank, Rita Prager,
Wolfgang Rabsch, Bernd Appel, Angelika Fruth, and Burkhard Malorny


Appl. Environ. Microbiol. July 2010 76: 4601
-
4610; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Antibiotic Resistance Patterns and Detectio
n of
bla
DHA
-
1

in
Salmonella

Species Isolates
from Chicken Farms in South Korea


Nabin Rayamajhi, Byeong Yeal Jung, Seung Bin Cha, Min Kyung Shin, Aeran Kim, Min Su
Kang, Kang Mu Lee, and Han Sang Yoo


Appl. Environ. Microbiol. July 2010 76: 4760
-
4764; publ
ished ahead of print June 4, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Genetic and Proteomic Analysis of Factors Affecting Serum Cholesterol Reduction by
Lactobacillus acidophilus

A4


Jin Lee, Younghoon Kim, Hyun Sun Yun, Jong Gun Kim, Sejong Oh, and Sae Hun Kim


A
ppl. Environ. Microbiol. July 2010 76: 4829
-
4835; published ahead of print May 21, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Transcriptomic and Phenotypic Responses of
Listeria monocytogenes

Strains
Possessing Different Growth Efficiencies under Acidic Conditions


John P. Bowman, Kim Jye L
ee Chang, Terry Pinfold, and Tom Ross


Appl. Environ. Microbiol. July 2010 76: 4836
-
4850; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





M
osaic
-
Like Sequences Containing Transposon, Phage, and Plasmid Elements among
Listeria monocytogenes

Plasmids


Carlos Canchaya, Vanessa Giubellini, Marco Ventura, Clara G. de los Reyes
-
Gavilán, and
Abelardo Margolles


Appl. Environ. Microbiol. July 2010 76
: 4851
-
4857; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Exopolysaccharide Synthesized by
Lactobacillus reuteri

Decreases the Ability of
Enterotoxigenic
Escheri
chia coli

To Bind to Porcine Erythrocytes


Yvonne Wang, Michael G. Gänzle, and Clarissa Schwab


Appl. Environ. Microbiol. July 2010 76: 4863
-
4866; published ahead of print May 14, 2010,

[Ab
stract]

[Full Text]

[PDF]

[Reprints and Permissions]





Biotechnology



Integra
tion of Insecticidal Protein Vip3Aa1 into
Beauveria bassiana

Enhances Fungal
Virulence to
Spodoptera litura

Larvae by Cuticle and
Per

Os

Infection


Yi Qin, Sheng
-
Hua Ying, Ying Chen, Zhi
-
Cheng Shen, and Ming
-
Guang Feng


Appl. Environ. Microbiol. July 2010
76: 4611
-
4618; published ahead of print May 21, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Physiology



Potential of Aerobic Denitrification by
Pseudomonas stutzeri

TR2 To Reduce Nitrous
Oxide Emissions from Wastewater Treatment Plant
s


Morio Miyahara, Sang
-
Wan Kim, Shinya Fushinobu, Koki Takaki, Takeshi Yamada, Akira
Watanabe, Keisuke Miyauchi, Ginro Endo, Takayoshi Wakagi, and Hirofumi Shoun


Appl. Environ. Microbiol. July 2010 76: 4619
-
4625; published ahead of print May 21, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]
[Supplemental material]

[Reprints and
Permissions]






Aquaculture Journals

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15

of
97




Geomicrobiology



Coupled Arsenotrophy in

a Hot Spring Photosynthetic Biofilm at Mono Lake, California


Shelley E. Hoeft, Thomas R. Kulp, Sukkyun Han, Brian Lanoil, and Ronald S. Oremland


Appl. Environ. Microbiol. July 2010 76: 4633
-
4639; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Influence of Forest Trees on
the Distribution of Mineral Weathering
-
Associated
Bacterial Communities of the
Scleroderma citrinum

Mycorrhizosphere


Christophe Calvaruso, Marie
-
Pierre Turpault, Elisabeth Leclerc, Jacques Ranger, Jean
Garbaye, Stéphane Uroz, and Pascale Frey
-
Klett


Appl.

Environ. Microbiol. July 2010 76: 4780
-
4787; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Weathering
-
Associated Bacteria from the Damma Glacier Forefield: Physiological
Capabilities and Impact on Grani
te Dissolution


Beat Frey, Stefan R. Rieder, Ivano Brunner, Michael Plötze, Stefan Koetzsch, Ales Lapanje,
Helmut Brandl, and Gerhard Furrer


Appl. Environ. Microbiol. July 2010 76: 4788
-
4796; published ahead of print June 4, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Diver
sity of Dissimilatory Sulfite Reductase Genes (
dsrAB
) in a Salt Marsh Impacted
by Long
-
Term Acid Mine Drainage


John W. Moreau, Robert A. Zierenberg, and Jillian F. Banfield


Appl. Environ. Microbiol. July 2010 76: 4819
-
4828; published ahead of print May 1
4, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Promotion of Mn(II) Oxidation and Remediation of Coal Mine Drainage in Passive
Treatment Systems by Diverse Fungal and Bacteria
l Communities


Cara M. Santelli, Donald H. Pfister, Dana Lazarus, Lu Sun, William D. Burgos, and Colleen
M. Hansel


Appl. Environ. Microbiol. July 2010 76: 4871
-
4875; published ahead of print May 21, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material
]

[Reprints and Permissions]





Invertebrate Microbiology



Enrichment and Physiological Characterization of a Novel
Nitrospira
-
Like Bacterium
Obtained from a Marine Sponge


Sandra Off, M
ashal Alawi, and Eva Spieck


Appl. Environ. Microbiol. July 2010 76: 4640
-
4646; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Beneficial Effect of
Verminephrobacter

Nephridial Symbionts on the Fitness of the
Earthworm
Aporrectodea tuberculata


Marie B. Lund, M
artin Holmstrup, Bente A. Lomstein, Christian Damgaard, and Andreas
Schramm


Appl. Environ. Microbiol. July 2010 76: 4738
-
4743; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and

Permissions]





Public Health Microbiology



Parallel Analyses of
Alexandrium catenella

Cell Concentrations and Shellfish Toxicity
in the Puget Sound


Sonya T. Dyhrman, Sheean T. Haley, Jerry A. Borchert, Bob Lona, Nicole Kollars, and Deana
L. Erdner


A
ppl. Environ. Microbiol. July 2010 76: 4647
-
4654; published ahead of print May 21, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]






Aquaculture Journals

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16

of
97




Enumeration and Characterization of Antimicrobial
-
Resistant
Escherichia coli

Bacteria
in Effluent from Municipal, Hospital, and Secondary Treatment Facility
Sources


Sandra Galvin, Fiona Boyle, Paul Hickey, Akke Vellinga, Dearbháile Morris, and Martin
Cormican


Appl. Environ. Microbiol. July 2010 76: 4772
-
4779; published ahead of print June 4, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissi
ons]





Multigeneration Cross Contamination of Mail with
Bacillus

Species Spores by
Tumbling


Jason Edmonds, Paul Clark, Leslie Williams, H. D. Alan Lindquist, Kenneth Martinez, Warren
Gardner, Sean Shadomy, and Jennifer Hornsby
-
Myers


Appl. Environ. Mic
robiol. July 2010 76: 4797
-
4804; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Sequence Diversity of Genes Encoding Botulinum Neurotoxin Type F


Brian H. Raphael, Mallory J. Choudoir, Carolina Lúquez, Rafael Fernández, and Susan E.
Maslanka


Appl. Environ. Microbiol. July 2010 7
6: 4805
-
4812; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Unsuitability of Quantitative
Bacteroidales

16S rRNA Gene Assays for Discerning
Fecal Contamination of Drinking Water


Paul W. J. J. van der Wielen an
d Gertjan Medema


Appl. Environ. Microbiol. July 2010 76: 4876
-
4881; published ahead of print May 28, 2010,

[Abstract]

[Full T
ext]

[PDF]

[Reprints and Permissions]





Quantitative Real
-
Time PCR Assays for Sensitive Detection of Canada Goose
-
Specific
Fecal Pollution in Wate
r Sources


B. Fremaux, T. Boa, and C. K. Yost


Appl. Environ. Microbiol. July 2010 76: 4886
-
4889; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Genetic Characteri
zation of
Vibrio vulnificus

Strains from Tilapia Aquaculture in
Bangladesh


Zahid H. Mahmud, Anita C. Wright, Shankar C. Mandal, Jianli Dai, Melissa K. Jones,
Mahmud Hasan, Mohammad H. Rashid, Mohammad S. Islam, Judith A. Johnson, Paul A.
Gulig, J. Glenn M
orris, Jr., and Afsar Ali


Appl. Environ. Microbiol. July 2010 76: 4890
-
4895; published ahead of print May 21, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Evolutionary and Genomic Microbiology



Adaptation in a Mouse Col
ony Monoassociated with
Escherichia coli

K
-
12 for More
than 1,000 Days


Sean M. Lee, Aaron Wyse, Aaron Lesher, Mary Lou Everett, Linda Lou, Zoie E. Holzknecht,
John F. Whitesides, Patricia A. Spears, Dawn E. Bowles, Shu S. Lin, Susan L. Tonkonogy,
Paul E.
Orndorff, R. Randal Bollinger, and William Parker


Appl. Environ. Microbiol. July 2010 76: 4655
-
4663; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Methods



Application of the
Saccharomyces cerevisiae

FLP/
FRT

Recombination System in
Filamentous Fungi for Marker Recyc
ling and Construction of Knockout Strains Devoid
of Heterologous Genes


Katarina Kopke, Birgit Hoff, and Ulrich Kück


Appl. Environ. Microbiol. July 2010 76: 4664
-
4674; published ahead of print May 14, 2010,



Aquaculture Journals

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17

of
97



[Abstract]

[Full Text]

[PDF]

[Supplemental materi
al]

[Reprints and Permissions]





Novel Assay To Assess Permissiveness of a Soil Microbial Community toward Receipt
of Mobile Genetic Elements


Sanin Mus
ovic, Arnaud Dechesne, Jan Sørensen, and Barth F. Smets


Appl. Environ. Microbiol. July 2010 76: 4813
-
4818; published ahead of print May 28, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Antibi
otic Resistance Markers for Genetic Manipulations of
Leptospira

spp.


Dante Poggi, Priscila Oliveira de Giuseppe, and Mathieu Picardeau


Appl.
Environ. Microbiol. July 2010 76: 4882
-
4885; published ahead of print May 28, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Simple, Fast, and Sensitive Method for Quantification of Tellurite
in Culture Media


Roberto C. Molina, Radhika Burra, José M. Pérez
-
Donoso, Alex O. Elías, Claudia Muñoz,
Rebecca A. Montes, Thomas G. Chasteen, and Claudio C. Vásquez


Appl. Environ. Microbiol. July 2010 76: 4901
-
4904; published ahead of print June 4, 2010,

[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Genetics an
d Molecular Biology



Structural and Functional Characterization of Diffusible Signal Factor Family Quorum
-
Sensing Signals Produced by Members of the
Burkholderia cepacia

Complex


Yinyue Deng, Ji'en Wu, Leo Eberl, and Lian
-
Hui Zhang


Appl. Environ. Microbi
ol. July 2010 76: 4675
-
4683; published ahead of print May 28, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Natural Competence in
Thermoanaerobacter

and
Thermoanaerobacterium

Species


A. Joe Shaw, David A. Hogsett, and Lee R. Lynd


App
l. Environ. Microbiol. July 2010 76: 4713
-
4719; published ahead of print May 14, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Acinetobacter baylyi

Starvation
-
Induced Genes Identified through Incubation in Long
-
Term Stationary Phase


C. Phoebe Lostr
oh and Bruce A. Voyles


Appl. Environ. Microbiol. July 2010 76: 4905
-
4908; published ahead of print May 28, 2010,
[Abstract]

[F
ull Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Biodegradation



Cometabolic Degradation of Tr
ichloroethene by
Rhodococcus

sp. Strain L4
Immobilized on Plant Materials Rich in Essential Oils


Oramas Suttinun, Rudolf Müller, and Ekawan Luepromchai


Appl. Environ. Microbiol. July 2010 76: 4684
-
4690; published ahead of print May 14, 2010,

[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Magnetospirillum bellicus

sp. nov., a Novel Dissimilatory Perchlorate
-
Reducing
Alphaproteobacterium Isolated from a Bioelectrical Reactor


J.
Cameron Thrash, Sarir Ahmadi, Tamas Torok, and John D. Coates


Appl. Environ. Microbiol. July 2010 76: 4730
-
4737; published ahead of print May 21, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Soil Type
-
Dependent Responses to Phenanthrene as Revealed by
Determining the
Diversity and Abundance of Polycyclic Aromatic Hydrocarbon Ring
-
Hydroxylating
Dioxygenase Genes by Using a Novel PCR Detection System


Guo
-
Chun Ding, Holger Heuer, Sebastian Zühlke, Michael Spiteller, Geertje Johanna Pronk,
Katja Heister, I
ngrid Kögel
-
Knabner, and Kornelia Smalla




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Appl. Environ. Microbiol. July 2010 76: 4765
-
4771; published ahead of print May 21, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Microbial Ecology



Diversity, Abundance, and Spatial Distribution of Sediment Ammonia
-
Oxidizing
Betaproteobacteria

in Response to Environmental Gradients
and Coastal
Eutrophication in Jiaozhou Bay, China


Hongyue Dang, Jing Li, Ruipeng Chen, Lin Wang, Lizhong Guo, Zhinan Zhang, and Martin
G. Klotz


Appl. Environ. Microbiol. July 2010 76: 4691
-
4702; published ahead of print May 28, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]
[Supplemental material]

[Reprints and
Permissions]





Modulation of Responses of
Vibrio parahaemolyticus

O3:K6 to pH and Temperature
Stresses by Growth at Different Salt Concentrations


W. Brian Whitaker, Michelle A. Parent, Lynn M. Naughton, Gary P. Richards, Seth L.
Blumerman, and E. Fidelma Boyd


Appl. E
nviron. Microbiol. July 2010 76: 4720
-
4729; published ahead of print May 14, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Influence of Soil Characteristics on the Diversity of Bacteria in the Southern Brazilian
Atlantic Forest


H. Faoro, A. C. Alves,
E. M. Souza, L. U. Rigo, L. M. Cruz, S. M. Al
-
Janabi, R. A. Monteiro, V.
A. Baura, and F. O. Pedrosa


Appl. Environ. Microbiol. July 2010 76: 4744
-
4749; published ahead of print May 21, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Repri
nts and Permissions]





Spatiotemporal Variations in Microcystin Concentrations and in the Proportions of
Microcystin
-
Producing Cells in Several
Microcystis aeruginosa

Populations


M. Sabart, D. Pobel, E. Briand, B. Combourieu, M. J. Salençon, J. F. Humb
ert, and D. Latour


Appl. Environ. Microbiol. July 2010 76: 4750
-
4759; published ahead of print May 28, 2010,
[Abstract]

[Full
Text]

[PDF]

[Reprints and Permissions]





Animal
-
to
-
Animal Variation in Fecal Microbial Diversity among Beef Cattle


Lisa M. Durso, Gregory

P. Harhay, Timothy P. L. Smith, James L. Bono, Todd Z. DeSantis,
Dayna M. Harhay, Gary L. Andersen, James E. Keen, William W. Laegreid, and Michael L.
Clawson


Appl. Environ. Microbiol. July 2010 76: 4858
-
4862; published ahead of print May 14, 2010,
[Abstract]

[Full Text]

[PDF]

[Reprints and Permissions]





Diversity of Formyltetrahydrofolate S
ynthetases in the Guts of the Wood
-
Feeding
Cockroach
Cryptocercus punctulatus

and the Omnivorous Cockroach
Periplaneta
americana


Elizabeth A. Ottesen and Jared R. Leadbetter


Appl. Environ. Microbiol. July 2010 76: 4909
-
4913; published ahead of print May
21, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Enzymology and Protein Engineering



Novel Carbohydrate
-
Binding Mod
ule Identified in a Ruminal Metagenomic
Endoglucanase


Cheng
-
Jie Duan, Jun
-
Liang Liu, Xi Wu, Ji
-
Liang Tang, and Jia
-
Xun Feng


Appl. Environ. Microbiol. July 2010 76: 4867
-
4870; published ahead of print May 14, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental

material]

[Reprints an
d Permissions]





Engineering of
Clostridium phytofermentans

Endoglucanase Cel5A for Improved
Thermostability




Aquaculture Journals

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19

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97



Wenjin Liu, Xiao
-
Zhou Zhang, Zuoming Zhang, and Y.
-
H. Percival Zhang


Appl. Environ. Microbiol. July 2010 76: 4914
-
4917; published ahead of pri
nt May 28, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]





Environmental Microbiology



Searching for Mesophilic
Thermotogales

Bacteria: "Mesotogas" in the Wild


Camilla L. Nesbø, Rajkumari Kumaraswamy, Marlena Dlutek, W. Fo
rd Doolittle, and Julia
Foght


Appl. Environ. Microbiol. July 2010 76: 4896
-
4900; published ahead of print May 21, 2010,
[Abstract]

[Full Text]

[PDF]

[Supplemental material]

[Reprints and Permissions]




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VOLUME

87,

PART

4
,

J
ULY

2010

Website


Research Articles


Biotechnological doxorubicin production: pathway and regulation engineering of
strains for enhanced production


Narayan Prasad Niraula
,
Seon
-
Hye Kim
,
Jae Kyung Sohng

and
Eung
-
Soo Kim


PDF (297.3 KB)
HTML


Engineering cellulolytic ability into bioprocessing organisms


Daniel C. la Grange
,
Riaan den Haan

and
Willem H. van Zyl


PDF (280.7 KB)
HTML


Production of chondroitin sulfate and chondroitin


Chiara Schiraldi
,
Donatella Cimini

and
Mario De Rosa


PDF (251.8 KB)
HTML


Proteins with antifungal properties and other medicinal applications from plants and
mushrooms


Jack H. Wong
,
T. B. Ng
,
Randy C. F. Cheung
,
X. J. Ye
,
H. X. Wang
,
S. K. Lam
,
P. Lin
,
Y. S.
Chan
,
Evandro F. Fang
,
Patrick H. K. Ngai
,
L. X. Xia
,
X. Y. Ye
,
Y. Jiang

and
F. Liu


PDF (457.1 KB)
HTML


Chemical diversity of biologically active metabolites in the sclerotia of
Inonotus
obliquus

and submerged culture strategies for up
-
regulating their producti
on


Weifa Zheng
,
Kangjie Miao
,
Yubing Li
u
,
Yanxia Zhao
,
Meimei Zhang
,
Shenyuan

Pan

and
Yucheng Dai


PDF (337.5 KB)
HTML


Expression and export: recombinant protein production systems for
Aspergillus


André Fleißner

and
Petra Dersch


P
DF (634.0 KB)
HTML


Metallomics: lessons for metalliferous soil remediation


Götz Haferburg

and
Erika Kothe


PDF (258.4 KB)
HTML


Biotechnological production and applications of
N
-
acetyl
-
D
-
neuraminic acid: current
state and perspectives


Fei Tao
,
Yinan Zhang
,
Cuiqing Ma

and
Ping Xu


PDF (316.6 KB)
HTML


Developments and perspectives of photobioreactors for biofuel production


Michael Morweiser
,
Olaf Kruse
,
Ben Hankamer

and
Clemens Posten


PDF

(438.7 KB)
HTML


Trends and challenges in the microbial production of lignocellulosic bioalcohol fuels


Christian Weber
,
Alexander Farwick
,
Feline Benisch
,
Dawid Brat
,
Heiko Dietz
,
Thorsten
Subtil

and
Eckhard Boles


PDF (351.0 KB)
HTML


Effects of acetic acid, eth
anol, and SO
2

on the removal of volatile acidity from acidic wines by
two
Saccharomyces cerevisiae

commercial strains


Alice Vilela
-
Moura
,
Dorit Schuller
,
Arlete Mendes
-
Faia

and
Manuela Côrte
-
Rea
l




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21

of
97



PDF (261.2 KB)
HTML


Production of geranylgera
niol on overexpression of a prenyl diphosphate synthase
fusion gene in
Saccharomyces cerevisiae


Chikara Ohto
,
Masayoshi Muramatsu
,
Shusei Obata
,
Eiji Sakuradani

and
Sakayu Shimizu


PDF (672.3 KB)
HTML


Novel biosynthesis of (
R
)
-
ethyl
-
3
-
hydroxyglutarate with (
R
)
-
enantioselective hydrolysis
of racemic ethyl 4
-
cyano
-
3
-
hydroxybutyate by
Rhodococcus erythropolis


Hua
-
Ping Dong
,
Zhi
-
Qiang Liu
,
Yu
-
Guo Zheng

and
Yin
-
Chu Shen


PDF (339.4 KB)
HTML


Directe
d microbial biosynthesis of deuterated biosurfactants and potential future
application to other bioactive molecules


Thomas J. Smyth
,
Amedea Perfumo
,
Roger Marchant
,
Ibrahim M. Banat
,
Minglei Chen
,
Robert K. Thomas
,
Jeffrey Penfold
,
Paul S. Stevenson

and
Neil J. Parry


PDF (164.8 KB)
HTML


Construction and expression of immunogenic hybrid enterotoxigenic
Escherichia coli

CFA/I and CS2 colo
nization fimbriae for use in vaccines


Joshua Tobias
,
Ann
-
Mari Svennerholm
,
Jan Holmgren

and
Michael Lebens


PDF (290.8 KB)
HTML


Site
-
directed mutagenesis of disulfide bridges in
Aspergillus niger

NRRL 3135 phytase
(PhyA), their expression in
Pichia pastori
s

and catalytic characterization


Edward J. Mullaney
,
Heather Locovare
,
Kandan Sethumadhavan
,
Stephanie Boone
,
Xin Gen
Lei

and

Abul H. J. Ullah


PDF (207.2 KB)
HTML


A novel salt
-
tolerant endo
-
β
-
1,4
-
glucanase Cel5A in
Vibrio

sp. G21 isolated from
mangrove soil


Zhaoming Gao
,
Lingwei Ruan
,
Xiulan Chen
,
Yuzhong Zhang

a
nd
Xun Xu


PDF

(462.0 KB)
HTML
Supplemental HTML


Molecular detection and diversity of xylanase genes in alpine tundra soil


Guozeng Wang
,
Yaru Wang
,
Peilong Yang
,
Huiying Luo
,
Huoqing Huang
,
Pengjun Shi
,
Kun
Meng

and
Bin Yao


PDF (514.0 KB)
HTML
Supplemental HTML


Identification and characterization of an avian β
-
defensin orthologue, avian β
-
defensin
9, from quails


Ruiqin Wang
,
Deying Ma
,
Lijuan Lin
,
Caiyuan Zhou
,
Z
ongxi Han
,
Yuhao Shao
,
Wenyan Liao

and
Shengwang Liu


PDF (333.0 KB)
HTML


Cloning, char
acterization, and engineering of fungal
L
-
arabinitol dehydrogenases


Byoungjin Kim
,
Ryan P. Sullivan

and

Huimin Zhao


PDF (191.6 KB)
HTML
Supplemental HTML


Characterization of two aldo

keto reductases from
Gluconobacter oxydans

621H
capable of regio
-

and stereoselective α
-
ketocarbonyl reduction


Paul Schweiger
,
Harald Gross

and
Uwe Deppenmeier


PDF (311.9 KB)
HTML


Chain transfer reaction catalyzed by various polyhydroxyalkanoate synthases with
poly(ethylene glycol) as an exog
enous chain transfer agent


Satoshi Tomizawa
,
Yuta Saito
,
Manami Hyakutake
,
Yoshiyuki Nakamura
,
Hideki Abe

and
Takeharu Tsuge




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97



PDF (422.9 KB)
HTML


Expression of
Trichoderma reesei

cellulases CBHI and EGI in
Ashbya gossypii


Orquídea Ribeiro
,
Marilyn Wiebe
,
Marja Ilmén
,
Lucília Domingues

and
Merja Penttilä


PDF (352.6 KB)
HTML


Retrotransposon expression in ethanol
-
stressed
Saccharomyces cerevisiae


Dragana Stanley
,
Sarah Fraser
,
Grant A. Stanley

and
Paul J. Chambers


PDF (224.7 KB)
HTML
Supplemental HTML


Genomic structure and promoter analysis of the
dsz

operon for dibenzothiophene
biodes
ulfurization from
Gordonia alkanivorans

RIPI90A


Mahmoud Shavandi
,
Majid Sadeghizadeh
,
Khosro Khajeh
,
Ghasemali Mohebali

and
Alireza
Zomorodipour


PDF (237.0 KB)
HTML


Exp
anding the
ku70

toolbox for filamentous fungi: establishment of complementation
vectors and recipient strains for advanced gene analyses


Neuza D. S. P. Carvalho
,
Mark Arentshorst
,
Min Jin Kwon
,
Vera Meyer

and
Arthur F. J. Ram


PDF (380.3 KB)
HTML



Functional analysis of genes f
or benzoate metabolism in the albicidin biosynthetic
region of
Xanthomonas albilineans


Saeed M. Hashimi

and
Robert G. Birch


PDF (457.0 KB)
HTML


Ferme
ntation characteristics of
Dekkera bruxellensis

strains


Johanna Blomqvist
,
Thomas Eberhard
,
Johan Schnürer

and
Volkmar Passoth


PDF (242.9 KB)
HTML


Effect of methanogenic substrates on anaerobic oxidation of methane and sulfate
reduction by an anaer
obic methanotrophic enrichment


Roel J. W. Meulepas
,
Christian G. Jagersma
,
Ahmad F. Khadem
,
Alfons J. M. Stams

and
Pie
t N. L. Lens


PDF (333.0 KB)
HTML



Lipidome profiling of
Saccharomyces cerevisiae

reveals pitching rate
-
dependent
fermentative performance


Hong
-
Chi Tian
,
Jian Zhou
,
Bin Qiao
,
Ying Liu
,
Jin
-
Mei Xia

and
Ying
-
Jin Yuan


PDF (1.3 MB)
HTML
Supplemental HTML


Combination of the 2A/furin technology with an animal component free cell line
development
platform process


Thomas Jostock
,
Zorica Dragic
,
Jianmin Fang
,
Karin Jooss
,
Burkhard Wilms

and
Hans
-
Peter
Knopf


PDF (338.3 KB)
HTML


I
-
Sce
I endonuclease: a new tool for DNA repair studies and genetic manipulations in
streptomycetes


Theresa Siegl
,
Lutz Petzke
,
Elisabeth Welle

and
Andriy Luzhetskyy


PDF (258.8 KB)
HTML
Supplemental HTML


A mini
-
Mu transposon
-
based method for multiple DNA fragment integration into
bacterial genomes


Xiao
-
Xing Wei
,
Zhen
-
Yu Shi
,
Zheng
-
Jun Li
,
Lei Cai
,
Qiong Wu

and
Guo
-
Qiang Chen


PDF (282.7 KB)
HTML




Aquaculture Journals

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23

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97



Mineralization of PCBs by the ge
netically modified strain
Cupriavidus necator

JMS34
and its application for bioremediation of PCBs in soil


Juan Matías Saavedra
,
Francisca Acevedo
,
Myriam González

and
Michael Seeger


PDF (401.5 KB)
HTML


Performance and microbial community

composition dynamics of aerobic granular
sludge from sequencing batch bubble column reactors operated at 20

°C, 30

°C, and
35

°C


Sirous Ebrahimi
,
Sébastien Gabus
,
Emmanuelle Rohrbach
-
Brandt
,
Maryam Hosseini
,
Pierre
Rossi
,
Julien Maillard

and
Christof Holliger


PDF (323.4 KB)
HTML
Supplemental HTML


Mineralization and transformati
on of monofluorophenols by
Pseudonocardia
benzenivorans


Eun
-
Ju Kim
,
Jong
-
Rok Jeon
,
Young
-
Mo Kim
,
Kumarasamy Murugesan

and
Yoon
-
Seok
Chan
g


PDF (192.9 KB)
HTML


Efficient degradation of
rice straw in the reactors packed by carbon fiber textiles


Kengo Sasaki
,
Masahiko Morita
,
Shin
-
ichi Hirano
,
Daisuke Sasaki
,
Naoya Ohmura

and
Yasuo Igarashi


PDF (288.1 KB)
HTML



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VOLUME

305
,

P
ART
1
-
4,

J
UNE

2010

Website


No new issue available




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VOLUME

43,

PART

1
,

J
ULY

2010

Website


No new issue available


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V
OL
UME
,

P
ART

,

J
UNE

2010

Website


Online first


Development of biofilm of
Vibrio alginolyticus

for oral immunostimulation of shrimp


S. R. Krupesha Sharma
,
K. M. Shankar
,
M. L. Sathyanarayana
,
Raj Reddy Patil
,
H. D.
Narayana Swamy

and
Suguna Rao


PDF (297.5 KB)
HTML


Low fishmeal diets fo
r Atlantic salmon,
Salmo salar

L., using soy protein concentrate
treated with graded levels of phytase


Chris G. Carter

and
M. Sajjadi


PDF (292.8 KB)
HTML


Differences in fatty acid composition of egg capsules from broodstock spotted
babylon,
Babylonia areolata
, fed a local trash fish and formulated diet under hatchery
conditions


N. Chaitanawisuti
,
S. Sangsawangchote

and
S. Piyatiratitivorakul


DOI: 10.1007/s10499
-
010
-
9353
-
4

PDF (205.8 KB)
HTML


Tolerance response to ammonia and nitrite in hatchlings paralarvae of
Octopus
vulgaris

and its toxic effects on prey consumption rate and chromatophores activity


Paloma F
eyjoo
,
Rodrigo Riera
,
Beatriz C. Felipe
,
Alí Skalli

and
Eduardo Almansa


PDF (401.6 KB)
HTML


Effects of two dietary protein levels on energy balance and digestive c
apacity of
Octopus maya


Carlos Rosas
,
Ariadna Sánchez
,
Cristina Pascual
,
Josué Aguila
,
Teresita Maldonado

and
Pedro Domingues


PDF (381.0 KB)
HTML


Growth and survival of grouper
Epinepheluscoioides

(Hamilton) larvae fed free
-
living
nematode
Panagrellus redivi
vus

at first feeding


Ofelia S. Reyes
,
Marietta N. Duray
,
Corazon B. Santiago

and
Manuele Ricci


PDF (217.5 KB)
HTML


Effect of the interaction between body weig
ht and temperature on growth and
maximum daily food intake in sharpsnout sea bream (
Diplodus puntazzo
)


Benjamín García García
,
Jesús Cerezo Valverde
,
Felipe Aguado
-
Giménez
,
José García
García

and
María D. Hernández


PDF (341.8 KB)
HTML


Effect of partial fish meal repl
acement by soybean meal on the growth performance
and biochemical indices of juvenile Japanese flounder
Paralichthys olivaceus


Jidan Ye
,
Xianghe Liu
,
Zijia Wang

and
Kun Wang


PDF (263.0 KB)
HTML


Effects of dietary lipid levels on growth performance, feed utilization and fatty acid
composition of juvenile Japanese seabass (
Lateolabrax japonicus
) reared in seawater


Jian
-
He Xu
,
Jie Qin
,
Bin
-
Lun Yan
,
Ming Zhu

and
Gang Luo


PDF
(220.6 KB)
HTML




Aquaculture Journals

Page:
27

of
97



Erratum to: Econometric model of viability/profitability of ongrowing sharp snout sea
bream (
Diplodus puntazzo
) in se
a cages


J. García García

and
B. García García


PDF (115.6 KB)
HTML


Behavioural response of carp (
Cyprinus carpio
, L.) pond stock upon occurrence of
hunting great cormorant (
Phalacrocorax carbo sinensis
) flocks


Jiří Kortan

and
Zdeněk Adámek


PDF (498.8 KB)
HTML


A preliminary study on the use of mannan oligosaccharides (MOS) in freshwate
r
crayfish,
Astacus leptodactylus

Eschscholtz, 1823 juvenile diets


Yavuz Mazlum
,
Erdal Yılmaz
,
M. A. Genç

and
Ozlem Guner


PDF (312.0 KB)
HTML


Effects of atrazine on t
he viability and the formation of byssus of the mussel
Mytilus
galloprovincialis


Dimitrios Karagiannis
,
Ioannis N. Vatsos

and
Panagiotis Angelidis


PDF (336.6 KB)
HTML


The effects of freshwater rearing on the whole body and m
uscle tissue fatty acid
profile of the European sea bass (
Dicentrarchus labrax
)


Arzu Özlüer Hunt
,
Ferbal Özkan
,
Kenan Engin

and
Nazmi Tekelioğlu


PDF (306.7 KB)
HTML


Antibacterial effect of medium
-
chain fatty acid: caprylic acid on gnotobiotic
Artemia
franciscana

nauplii against shrimp pathogens
Vibrio harveyi