Publications SSIMPA 2008-2012

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Feb 22, 2014 (3 years and 5 months ago)

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Publications

SSIMPA

20
08
-
201
2


2012 Publications SSIMPA




Abla, M., Durand, G.,
Breyton, C
., Raynal, S.,
Ebel, C
., and Pucci, B.

A diglucosylat
ed fluorinated surfactant to handle integral membrane proteins in aqueous solution.

(2012)
Journal of Fluorine C
hemistry

134
, 63
-
71.




Basit, H., Sharma, K. S., Van der Heyden, A.., Gondran C., Breyton C., Dumy, P., Winnik, F. M., and
Labbe P.,

Amphipol mediated surface immobilization of FhuA: a platform for label
-
free detection of the bacteriophage
protein pb5
.


(2
012)
Chemical

Commun
ication

48
, 6037
-
6039
.




Boncoeur
, E.,
Durmort,

C.,
Bernay,
B.,
Ebel, C
.,
Di Guilmi
,

A.
-
M., Vernet
,

T.
,

Jault
,

J.
-
M.

PatA and PatB form a functional heterodimeric ABC multidrug efflux transporter responsible for the resistance
of /Strept
ococcus pneumoniae /to//fluoroquinolones.


(2012)

Biochemistry

51
, 7755
-
7765





Dach, I., Olesen, C., Signor, L., Nissen, P., le Maire, M., Møller, J. V., and
Ebel, C
.

Active detergent solubilized H+,K+
-
ATPase is a monomer


J. Biol. Chem.
(2012, In press)

d
oi:10.1074/jbc.M112.398768




Deniaud, A., Panwar, P., Frelet
-
Barrand, A., Bernaudat, F., Juillan
-
Binard, C.,
Ebel, C.,

Rolland, N.,
and Pebay
-
Peyroula, E.

Oligomeric Status and Nucleotide Binding Properties of the Plastid ATP/ADP Transporter 1: Toward a
Mol
ecular Understanding of the Transport Mechanism.

(2012)
PloS one

7
, e32325.




Flayhan, A
., Wien, F., Paternostre, M., Boulanger, P., and
Breyton, C.

New insights into pb5, the receptor binding protein of bacteriophage T5, and its interaction with its Esch
erichia
coli receptor FhuA.

(2012) Biochimie

94
, 1982
-
1989.




Maitre, M., Weidmann, S., Rieu, A., Fenel, D., Schoehn, G.,
Ebel, C
., Coves, J., and Guzzo, J.

The oligomer plasticity of the small heat shock protein Lo18 from Oenococcus oeni influences its ro
le in both
membrane stabilization and protein protection.

(2012)
The Biochemical journal

444
, 98
-
104.




Motta, F. N., Bastos, I. M. D., Faudry, E.,
Ebel, C.,

Lima, M. M., Neves, D., Ragno, M., Barbosa, J., de
Freitas, S. M., and Santana, J. M.

The Trypano
soma cruzi Virulence Factor Oligopeptidase B (OPBTc) Assembles into an Active and Stable
Dimer.

(2012)
PloS one

7
, e30431.




Sharma, K. S., Durand, G., Gabel, F., Bazzacco, P., Le Bon, C., Billon
-
Denis, E., Catoire, L. J., Popot,
J. L.,
Ebel, C.,

and Pucci
, B.

Grafted
-
Glucose based amphiphilic NAPols. Synthesis, solution behavior and first biochemical properties.

(2012)
Langmuir

28

: 4625
-
4639



2012 Book Chapter SSIMPA





Le Roy, A
., Nury, H., Wiseman, B., Sarwan, J., Jault, J.
-
M., and
Ebel, C.

Sedimenta
tion velocity analytical ultracentrifugation for the characterization of membrane proteins

(2012, In press) in Membrane Biogenesis, Methods in biology, Springer, New
-
York.






Salvay, A. G., Communie, G., and
Ebel, C.


Sedimentation Velocity Analytical Ultr
acentrifugation for Intrinsically Disordered Proteins

(2012) in Intrinsically Disordered Protein Analysis Vol. Volume 2, Methods and Experimental Tools, pp 91
-
104,
Springer, New
-
York.



2011 Publications SSIMPA




Brown, P. H., Balbo, A., Zhao, H.,
Ebel, C.
,

and Schuck, P.

Density contrast sedimentation velocity for the determination of protein partial
-
specific volumes

(2011)
PloS one

6
, e26221.




Cadavid
-
Restrepo G., Gastardello T. S., Faudry E., Silva H., Bastos I. M. D., Negreiros R. S., Lima M.
M., Assump
ção T. C., Almeida K. C., Ragno M.,

Ebel C.
, Ribeiro B. M., Felix C. R., Santana J. M.

The major leucyl aminopeptidase of Trypanosoma cruzi (LAPTc) assembles into a homohexamer and belongs to
the M17 family of metallopeptidases

(2011)
BMC Biochemistry

12
:4
6




Ebel
C.


Sedimentation velocity to characterize surfactants and solubilized membrane proteins.

(2011)
Methods

54
: 56

66




El Ghachi, M., Mattei, P. J., Ecobichon, C., Martins, A., Hoos, S., Schmitt, C., Colland, F.,
Ebel, C.
,
Prevost, M. C., Gabel, F.
, England, P., Dessen, A., Boneca, I. G.

Characterization of the elongasome core PBP2 : MreC complex of Helicobacter pylori

(2011)
Mol.microbiol.

82
:68
-
86.




Galian

C.,
Manon, F.
, Dezi, M., Torres, C.,
Ebel C.
, Levy D., and Jault

J. M.

Optimized Purificat
ion of a Heterodimeric ABC Transporter in a Highly Stable Form Amenable to 2
-
D
Crystallization,

(2011)

PloS one

6
, e19677.




Park K.
-
H., Billon
-
Denis E., Dahmane T., Lebaupain F., Pucci B.,
Breyton C.

and Zito F.

In the cauldron of cell
-
free synthesis of m
embrane proteins

: playing with new surfactants.

(2011)

New Biotechnology

28

(3)

: 255
-
261




Popot J.
-
L., Althoff T., Bagnard D., Baneres J. L., Bazzacco P., Billon
-
Denis E., Catoire L. J., Champeil
P., Charvolin D., Cocco M. J., Cremel G., Dahmane T., de

la Maza L. M.,
Ebel C
., Gabel F., Giusti F., Gohon
Y., Goormaghtigh E., Guittet E., Kleinschmidt J. H., Kuhlbrandt W., Le Bon C., Martinez K. L., Picard M.,
Pucci B., Sachs J. N., Tribet C., van Heijenoort C., Wien F., Zito F., and Zoonens M.

Amphipols f
rom a to z

(2011)
Annual review of biophysics

40
: 379
-
408.




Kauffmann P, Ith A, O'Brien D, Gaude V, Boué F, Combe S, Bruckert F,
Schaack B
, Dempsey NM,
Haguet V, Reyne G.

Diamagnetically trapped a
rrays of living cells above micromagnets.

(
2011
)
Lab Chip

11
, 3153
-
3161
.



2011 Book Chapter SSIMPA




Salvay A. G, Communie G.,
Ebel C.

Sedimentation velocity analytical ultracentrifugation for intrinsically disordered proteins.

In. Intrinsically Disordere
d Proteins: Volume I. Experimental Techniques
,

V.
Uveski Ed., In
“Methods in
Molecular Biology”, Walker John Ed.



2010 Publications SSIMPA




Bailleul B., Cardol P.,
Breyton C.
, Finazzi G.


Electrochromism

: a useful probe to study algal photosynthesis.

(
2010)
Photosynthesis Research

106
(1
-
2):179
-
189




Breyton C.
, Pucci B., Popot J.
-
L.

Amphipols and fluorinated surfactants

: Two alternatives to detergents for studying membrane proteins in vitro.

(2010)
Methods in Molecular Biology

601

: 219
-
45




Montserret
R., Saint N., Vanbelle C.,
Salvay A
., Simorre J.
-
P.,
Ebel C.
, Sapay N., Renisio1 J.
-
G.,
Böckmann A., Steinmann E., Pietschman T., Dubuisson J., Chipot C., Penin F.,

NMR Structure and ion channel activity of the P7 protein from hepatitis C virus

(2010)
J. B
iol. Chem.
285
:31446
-
61.




Prunetti L., Infossi P., Brugna1 M.,
Ebel C.
, Giudici
-
Orticoni M.
-
T., Guiral M.

A new functional sulfide oxidase
-
oxygen reductase supercomplex in the membrane of the hyperthermophilic
bacterium
Aquifex aeolicus

(2010)

J. Biol. Che
m.

285
: 41815
-
41826




Salvay A.G.
, Gabel F., Pucci B., Santos J., Howard E. I.,
Ebel C.
,

Structure and Interactions of Fish Type III Antifreeze Protein in Solution

(2010)
Biophys. J.

99

609

18.



2010 Book Chapter SSIMPA




Manon F., Ebel, C.

Analytical ultra
centrifugation, a useful tool to probe intrinsically disordered proteins


(2010) In: Instrumental Analysis of Intrinsically Disordered Proteins: Assessing Structure and Conformation,
Chapter 15, Uversky V.N. and Longhi S. eds., John Wiley and Sons (Hoboken
, New Jersey)



2009 Publications SSIMPA




Bazz
acco P., Sharma K.S., Durand G., Giusti F.,
Ebel C.
, Popot J.
-
L., Pucci

B.,

Trapping and stabilization of integral membrane proteins by hydrophobically grafted glucose
-
based telomers

(2009).
Biomacromolecules

10
, 3317
-
3326.




Breyton C.
, Gabel F., Abla M., Pierre Y., Lebaupain F., Durand G., Popot J.
-
L.,
Ebel C.
, Pucci B.,

Micellar and biochemical properties of (hemi)fluorinated surfactants are controlled by the size of the polar head

(2009)
Biophys. Journal.

97
, 1077
-
86.




Tabarani

G., Thépaut

M., Stroebel D.,
Ebel C.
, Vivès C., Vachette P., Durand D.,Fieschi F.,

DC
-
Sign neck domain is a pH
-
sensor controlling oligomerization: SAXS and hydrodynamic studies of
extracellular domain


(2009)

J
. Biol. Chem
. (284)32 212
29
-
40




Thépaut M., Valladeau J., Nurisso A., Kahn R., Arnou B., Vivès C., Sealand S.,
Ebel C.
, Monnier C.,
Dezutter
-
Dambuyant C., Imberty A., Fieschi F.

Structural Studies of Langerin and Birbeck Granules: a Macromolecular Organization Model.

(2009)
Bioche
mistry

(48)12

: 2684
-
98.




Thibault J., Faudry E.,
Ebel C.,

Attree I., Elsen S.

Anti
-
activator ExsD forms a 1:1 complex with ExsA to inhibit transcription of type III secretion operons.

(2009)
J. Biol. Chem
. 284(23) 15762
-
70.




Gidrol X, Fouqué B, Ghenim L,
Haguet V, Picollet
-
D'hahan N,
Schaack B
.

2D and 3D cell microarrays in pharmacology.

Curr Opin Pharmacol. 2009 Oct;9(5):664
-
8. Epub 2009 Jun 10.
Review.



2008 Publications SSIMPA




Cardol, P., Ba
illeul, B., Rappaport, F., Derelle, E., Beal, D.,
Breyton, C
., Bailey, S., Wollman, F. A.,
Grossman, A., Moreau, H., and Finazzi, G.

An original adaptation of photosynthesis in the marine green alga Ostreococcus

(2008)
Proc Natl Acad Sci U S A

105
, 7881
-
7
886.




Gaillard J., Neumann E., Barbier E.,
Ebel C.
, Van Damme D., Geelen D., Vantard M.

Two Microtubule
-
Associated Proteins of the Plant MAP65 family promote anti
-
parallel microtubule bundling

(2008 )
Mol Biol Cell.

19
(
10
):
4534
-
44
.




Gohon Y., Dahmane T., R
uigrok R.W.H., Schuck P., Charvolin D., Rappaport F., Timmins P.,
Engelman D. M., Tribet C., Popot J.
-
L.,
Ebel C.

Bacteriorhodopsin/amphipol complexes: structural and functional properties.

(2008)
Biophys. Journal.

94, 3523
-
37.




Grzela R.,

Szolajska E.,
Eb
el C.
,

Madern D.,

Favier A.,

Wojtal I., Zagorski W., Chroboczek J.

Virulence factor of potato virus Y genome
-
attached terminal protein VPg, is a highly disordered protein


(2008)
J. Biol. Chem.
283, 213
-
21.




le Maire M., Arnou B., Olesen

C.,
Georgin D.,
Eb
el C.
, Møller J. V.

Detergent binding and structural characterization of membrane proteins by gel chromatography and analytical
ultracentrifugation: the example of the sarcoplasmic reticulum Ca2+
-
ATPase

(2008)
Nat Protoc.

3
(
11
):
1782
-
95
.




Li Y.
-
L., Maurel,
M.
-
C.,
Ebel C.

Vergne J., Pipich V., Zaccai G.,

Self
-
association of adenine dependent hairpin ribozymes

(2008)

Eur. Biophys. J.

37, 173
-
182.




Nury H.,
Manon F.
, Arnou B.
,
le Maire M
.
,
Pebay
-
Peyroula E
.
,
Ebel C
.

Mitochondrial Bovine ADP/ATP Carrier in Detergent Is Predominantly Monomeric but Also Forms Multimeric
Species

(2008)
Biochemistry
(47) 12319
-
12331.




Sharma K. S., Durand G., Giusti F., Olivier B., FabianoA.
-
S., Bazzacco P., Dahmane T.,
Ebel C.
, Popot
J.
-
L., Pucci B.

Glucose
-
Based Amphiphilic Telomers Designed to Keep Membrane Proteins Soluble in Aqueous Solutions:

Synthe
sis and Physical
-
Chemical Characterization


(2008)
Langmuir

(24)2 13581
-
90.



2008 Book Chapter SSIMPA




Ebel C., Characterization and Stabilizationof solubilized membrane proteins


(2008)
Biotechnol & Biotechnol. Eq.(22)
620
-
24