Cyndy Parr (ppt) - Phenotype RCN

pielibraryInternet and Web Development

Dec 4, 2013 (3 years and 11 months ago)

81 views

Who am I? Cyndy Parr




Ontology


Developer


Skeptic
(middleman & user?)

Behavior

Semantic Prototypes in Research Ecoinformatics

Why ontologies?

SPIRE

LepTree

EOL

“What are the body weights of
mammalian predators of
invasive fish?”

Thought they might be useful

????

http://www.bbc.co.uk/wildlifefinder/

Tools

SPIRE

LepTree

EOL

Protégé & Swoop, hand
-
coding,
Triple Shop, RDF 1
-
2
-
3

Customized Drupal modules,
Excel, Sesame triple store

????

Roadblocks

SPIRE

LepTree

EOL

Availability of other data

Tool development, sociology

Priorities

Vision

SPIRE

LepTree

EOL



Cross
-
walk glossaries, explore
EvoDevo patterns

Help others find & integrate
data, quality checks?

Collaborators

SPIRE

LepTree

UMBC
: Tim Finin, Joel Sachs, Li
Ding,
UMCP
: David Wang,
RMBL
:
Neo Martinez, Rich Williams,
Jennifer Dunne,
UC Davis
: Jim
Quinn, Allan Hollander,
Animal
Diversity Web:
Phil Myers, Roger
Espinosa

UMD
: Charlie Mitter, Jerry Regier,
Mike Cummings, John Park
SI
: Don
Davis, John Brown,
U Minn
: Susan
Weller


The Biodiversity Heritage Library

The Field Museum of Natural History

The Missouri Botanical Garden

The Marine Biological Laboratory

Harvard University

The Smithsonian Institution

EOL Cornerstone
Institutions



http://NodeXL.codeplex.com

NCBI