ZopRA*

obtainablerabbiData Management

Jan 31, 2013 (4 years and 6 months ago)

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ZopRA


Data Centralization


Online System


International Cooperation


Access Rights


Internet Security (SSL / https)


Data Integrity

TILLING Workflow
?

PSDB

1. Mutagenized M1 Plants

2. M2 Seed Bags, M2 Plants

4. Phenotype Screening

11. M3 Seed / M3 Plants, Phenotyping /
Genotyping

TILLINGDB

3. Microtiter Plates

5. Pooled Plates

6./7. Gel Entries

8. Hits / Fails

9. Gel Plates

10. Sequencing / ParseSNP Reports

Plant Creation

Plant Creation


Instructions for
gardeners (pdf)


Plants generated


Attribute Inheritance


Plant Search


Plant Search Result


Plant View


Phenotype Multi Edit


Seed Creation


Seed Creation


Simple Interface


Fast
Reproduction


Attribute
Inheritance


Seed View


TILLING Connection


TILLING Connection


Identified Mutants are marked in the PSDB


[Evidence Levels]


(Mapping, TILLING, Sequencing)

TILLING Results



Database Population

(Lotus / TILLING)


Plants:





34.929


Seed Bags:



40.601


CRFs:





254 (since May 2004)


Persons:




73 (29 logins)


Plates:





174 (66N / 23P / 85G)


Gene Sequences:

60


Primer Pairs:



139


Gels:





932

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