2007 Research Publications

[1
-
45]

2007
MI
CROBIOLOGY RES PUBLICATIONS at 8
-
8
-
2007


1.

Albert, M.J., Haridas, S., Steer, D., Dhaunsi, G.S., Smith, A.I., and
Adler, B.
,
Identifica
tion of a Campylobacter jejuni protein that cross
-
reacts with cholera toxin.

Infect
Immun, 2007.
75
(6): p. 3070
-
3073.


Category: Immunology
Impact Factor: 4.004
Ranking: 27/117


2.

Al
-
Hasani, K.
,
Boyce, J.
,
McCarl, V.P.
, Bottomley, S., Wilkie, I., and
Ad
ler, B.
,
Identification of novel immunogens in Pasteurella multocida.

Microb Cell Fact, 2007.
6
(3):
p. 1
-
5.


Category/Impact Factor/Ranking: Not Listed


3.

Chin, R., Earnest
-
Silveira, L., Koeberlein, B., Franz, S., Zentgraf, H.,
Dong, X.
,
Gowans,
E.
, Bock,

C.T., and Torresi, J.,
Modulation of MAPK pathways and cell cycle by replicating
hepatitis B virus: Factors contributing to hepatocarcinogenesis.

J Hepatol, 2007.
47
(3): p.
325
-
337.


Category: Gastroenterology & Hepatology
Impact Factor: 6.073
Ranking:
4/48


4.

Clements, A., Tull, D., Jenney, A.W., Farn, J.L., Kim, S.H., McPhee, J.B., Hancock, R.E.,
Hartland, E.L.
, Pearse, M.J., Wijburg, O.L., McConville, M.J., and Strugnell, R.A.,
Secondary acylation of Klebsiella pneumoniae lipopolysaccharide contribut
es to sensitivity
to antibacterial peptides.

J Biol Chem, 2007.
282
(21): p. 15569
-
15577.


Category: Biochemistry & Molecular Biology
Impact Factor: 5.808
Ranking: 39/262


5.

Cullen, P.A.
,
From Genomes to Protective Antigens
-
Designing vaccines (GPADV 2006
).
Designing improved and novel vaccines in the future.

IDrugs, 2007.
10
(2): p. 109
-
111.


Category: Pharmacology & Pharmacy
Impact Factor: 1.429
Ranking: 130/199


6.

Davis, C.B., Hartnell, R.D., Madge, P.D., Owen, D.J., Thomson, R.J., Chong, A.K.,
Coppe
l,
R.L.
, and Itzstein, M.V.,
Synthesis and biological evaluation of galactofuranosyl alkyl
thioglycosides as inhibitors of mycobacteria.

Carbohydr Res, 2007.
342
(12
-
13): p. 1773
-
1780.


Category: Biochemistry & Molecular Biology
Impact Factor: 1.703

Ranki
ng: 185/262


7.

de Jonge, M.I.,
Stinear, T.
, Cole, S.T., and Brosch, R.,
The mycobacterium: a
postgenomic view
, in
Bacterial Pathogenomics
, K.N.G.P. MJ Pallen, Editor. 2007, ASM
Press: Washington, DC, USA. p. 49
-
89.


8.

Eisen, D.P.,
Wang, L.
, Jouin, H.,
Mu
rhandarwati, E.E.
,
Black, C.G.
, Mercereau
-
Puijalon,
O., and
Coppel, R.L.
,
Antibodies elicited in adults by a primary Plasmodium falciparum
blood
-
stage infection recognize different epitopes compared with immune individuals.

Malar J, 2007.
6
(1): p. 86.


Cat
egory: Parasitology
Impact Factor: 2.748

Ranking: 5/23


9.

Fernandez
-
Miyakawa, M.E., Fisher, D.J.,
Poon, R.
, Sayeed, S.,
Adams, V.
,
Rood, J.
,
McClane, B.A.
, and Uzal, F.A.,
Both epsilon
-
toxin and beta
-
toxin are important for the
lethal properties of Clos
tridium perfringens type B isolates in the mouse intravenous
injection model.

Infect Immun, 2007.
75
(3): p. 1443
-
1452.


Category: Infectious Diseases
Impact Factor: 4.004
Ranking: 9/47


10.

Fernandez
-
Miyakawa, M.E., Sayeed, S., Fisher, D.J.,
Poon, R.
,
Ad
ams, V.
,
Rood, J.I.
,
McClane, B.A., Saputo, J., and Uzal, F.A.,
Development and application of a mouse oral
challenge model for studying Clostridium perfringens type D infection.

Infect Immun,
2007.
E
-
Pub
.


Category: Infectious Diseases
Impact Factor: 4.0
04

Ranking: 9/47


11.

Fritz, J.H., Le Bourhis, L., Sellge, G., Magalhaes, J.G., Fsihi, H., Kufer, T.A., Collins, C.,
Viala, J.,
Ferrero, R.L.
, Girardin, S.E., and Philpott, D.J.,
Nod1
-
mediated innate immune
recognition of peptidoglycan contributes to the

onset of adaptive immunity.

Immunity,
2007.
26
(4): p. 445
-
59.


Category: Immunology
Impact Factor: 18.306
Ranking: 4/117


12.

Fyfe, J.A., Lavender, C.J., Johnson, P.D., Globan, M., Sievers, A., Azuolas, J., and
Stinear, T.P.
,
Development and application

of two multiplex real
-
time PCR assays for the
detection of Mycobacterium ulcerans in clinical and environmental samples.

Appl Environ
Microbiol, 2007.
E
-
Pub
.


Category: Biotechnology & Applied Microbiology
Impact Factor: 3.532
Ranking: 26/140


13.

Han,
X.
,
Kennan, R.M.
,
Parker, D.
,
Davies, J.K.
, and
Rood, J.I.
,
Type IV Fimbrial
Biogenesis is Required for Protease Secretion and Natural Transformation in Dichelobacter
nodosus.

J Bacteriol, 2007.
189
(14): p. 5022
-
5033.


Category: Microbiology
Impact Factor
: 3.993
Ranking: 16/88


14.

Haqshenas, G.,
Dong, X.
,
Netter, H.
, Torresi, J., and
Gowans, E.J.
,
A chimeric GB virus
B encoding the hepatitis C virus hypervariable region 1 is infectious in vivo.

J Gen Virol,
2007.
88
(Pt 3): p. 895
-
902.


Category: Biotechn
ology & Applied Microbiology
Impact Factor: 3.110
Ranking: 29/140


15.

Haqshenas, G., Mackenzie, J.M.,
Dong, X.
, and
Gowans, E.J.
,
Hepatitis C virus p7
protein is localized in the endoplasmic reticulum when it is encoded by a replication
-
competent genome
.

J Gen Virol, 2007.
88
(Pt 1): p. 134
-
42.


Category: Biotechnology & Applied Microbiology
Impact Factor: 3.110
Ranking: 29/140


16.

Harper, M.
,
Boyce, J.D.
, Cox, A.D., St Michael, F., Wilkie, I.W., Blackall, P.J., and
Adler,
B.
,
Pasteurella multocida exp
resses two LPS glycoforms simultaneously but only a single
form is required for virulence: identification of two acceptor specific heptosyl I
transferases.

Infect Immun, 2007.
75
(8): p. 3885
-
3893.


Category: Immunology
Impact Factor: 4.004
Ranking: 27/11
7


17.

Hill, M.K.
,
Bellamy
-
McIntyre, A.
, Vella, L.J., Campbell, S.M., Marshall, J.A.,
Tachedjian, G.
, and
Mak, J.
,
Alteration of the proline at position 7 of the HIV
-
1 spacer
peptide p1 suppresses viral infectivity in a strain dependent manner.

Curr HIV Re
s, 2007.
5
(1): p. 69
-
78.


Category: Infectious Diseases
Impact Factor:3.687
Ranking: 12/47


18.

Hilty, M., Kaser, M., Zinsstag, J.,
Stinear, T.
, and Pluschke, G.,
Analysis of the
Mycobacterium ulcerans genome sequence reveals new loci for variable number

tandem
repeats (VNTR) typing.

Microbiology, 2007.
153
(Pt 5): p. 1483
-
7.


Category: Microbiology
Impact Factor: 3.139
Ranking: 26/88


19.

Lavender, C.J., Senanayake, S.N., Fyfe, J.A., Buntine, J.A., Globan, M.,
Stinear, T.P.
,
Hayman, J.A., and Johnson, P
.D.,
First case of Mycobacterium ulcerans disease
(Bairnsdale or Buruli ulcer) acquired in New South Wales.

Med J Aust, 2007.
186
(2): p.
62
-
3.


Category: Medicine, General & Internal
Impact Factor: 2.582
Ranking: 21/103


20.

Lea
-
Smith, D.J.
, Pyke, J.S., T
ull, D., McConville, M.J.,
Coppel, R.L.
, and
Crellin, P.K.
,
The reductase that catalyzes mycolic motif synthesis is required for efficient attachment of
mycolic acids to arabinogalactan.

J Biol Chem, 2007.
282
(15): p. 11000
-
11008.


Category: Biochemistry &

Molecular Biology
Impact Factor: 5.808
Ranking: 39/262


21.

Leyton, D.L.
, Adams, L.M.,
Kelly, M.
,
Sloan, J.
, Tauschek, M., Robins
-
Browne, R.M., and
Hartland, E.L.
,
Contribution of a novel gene rpeA encoding a putative autotransporter
adhesin to intestin
al colonization by rabbit enteropathogenic Escherichia coli.

Infect
Immun, 2007.
E
-
Pub
.


Category: Infectious Diseases
Impact Factor: 4.004

Ranking: 9/47


22.

Li, J., Miyamoto, K., and
McClane, B.A.
,
Comparison of Virulence Plasmids Among
Clostridium per
fringens Type E Isolates.

Infect Immun, 2007.
75
(4): p. 1811
-
1819.


Category: Immunology
Impact Factor: 4.004
Ranking: 27/117


23.

Li, S., Jones, K.L., Woollard, D.J., Dromey, J., Paukovics, G., Plebanski, M., and
Gowans,
E.J.
,
Defining target antigens f
or CD25(+)FOXP3(+)IFN
-
gamma(
-
) regulatory T cells in
chronic hepatitis C virus infection.

Immunol Cell Biol, 2007.
85
(3): p. 197
-
204.


Category: Immunology
Impact Factor: 3.674
Ranking: 34/117


24.

Malet, H., Egloff, M.P., Selisko, B.,
Butcher, R.E.
,
Wri
ght, P.J.
, Roberts, M., Gruez, A.,
Sulzenbacher, G., Vonrhein, C., Bricogne, G., Mackenzie, J.M., Khromykh, A.A., Davidson,
A.D., and Canard, B.,
Crystal structure of the RNA polymerase domain of the West Nile
virus non
-
structural protein 5.

J Biol Chem, 2
007.
282
(14): p. 10678
-
10689.


Category: Biochemistry & Molecular Biology
Impact Factor: 5.808
Ranking: 39/262


25.

Matsunaga, J.,
Lo, M.
,
Bulach, D.M.
, Zuerner, R.L.,
Adler, B.
, and Haake, D.A.,
Response of Leptospira interrogans to Physiologic Osmolari
ty: Relevance in Signaling the
Environment
-
to
-
Host Transition.

Infect Immun, 2007.
75
(6): p. 2864
-
2874.


Category: Immunology
Impact Factor: 4.004
Ranking: 27/117


26.

McKean, S.C.,
Davies, J.K.
, and
Moore, R.J.
,
Probing the heat shock response of
Coryne
bacterium pseudotuberculosis: The major virulence factor, phospholipase D, is
downregulated at 43 degrees C.

Res Microbiol, 2007.
158
(3): p. 279
-
286.


Category: Microbiology
Impact Factor: 2.504
Ranking: 35/88


27.

McKean, S.C.,
Davies, J.K.
, and Moore,
R.J.,
Expression of phospholipase D, the major
virulence factor of Corynebacterium pseudotuberculosis, is regulated by multiple
environmental factors and plays a role in macrophage death.

Microbiology, 2007.
153
(Pt
7): p. 2203
-
11.


Category: Microbiology
Impact Factor: 3.139

Ranking: 26/88


28.

Moritoki, Y., Lian, Z.X., Wulff, H., Yang, G.X., Chuang, Y.H., Lan, R.Y., Ueno, Y., Ansari,
A.A.,
Coppel, R.L.
, Mackay, I.R., and Gershwin, M.E.,
AMA production in primary biliary
cirrhosis is promoted by the TLR9
ligand CpG and suppressed by potassium channel
blockers.

Hepatology, 2007.
45
(2): p. 314
-
322.


Category: Gastroenterology & Hepatology
Impact Factor: 10.446
Ranking: 2/48


29.

Myers, G.S.,
Parker, D.
,
Al
-
Hasani, K.
,
Kennan, R.M.
,
Seemann, T.
, Ren, Q., Ba
dger,
J.H., Selengut, J.D., Deboy, R.T., Tettelin, H.,
Boyce, J.D.
, McCarl, V.P.,
Han, X.
, Nelson,
W.C., Madupu, R., Mohamoud, Y., Holley, T., Fedorova, N., Khouri, H., Bottomley, S.P.,
Whittington, R.J.,
Adler, B.
, Songer, J.G.,
Rood, J.I.
, and Paulsen, I
.T.,
Genome
sequence and identification of candidate vaccine antigens from the animal pathogen
Dichelobacter nodosus.

Nat Biotechnol, 2007.
25
(5): p. 569
-
575.


Category: Biotechnology & Applied Microbiology
Impact Factor: 22.672
Ranking:
2/140


30.

Nissl
ey, D.V., Radzio, J., Ambrose, Z., Sheen, C.W., Hamamouch, N., Moore, K.L.,
Tachedjian, G.
, and Sluis
-
Cremer, N.,
Characterization of novel nonnucleoside reverse
transcriptase (RT) inhibitor resistance mutations at residues 132 and 135 in the 51kDa
subunit

of HIV
-
1 RT.

Biochem J, 2007.
404
(1): p. 151
-
157.


Category: Biochemistry & Molecular Biology
Impact Factor: 4.100
Ranking: 66/262


31.

Oertelt, S., Rieger, R., Selmi, C., Invernizzi, P., Ansari, A.A.,
Coppel, R.L.
, Podda, M.,
Leung, P.S., and Gershwin,

M.E.,
A sensitive bead assay for antimitochondrial antibodies:
Chipping away at AMA
-
negative primary biliary cirrhosis.

Hepatology, 2007.
45
(3): p.
659
-
665.


Category: Gastroenterology & Hepatology
Impact Factor: 10.446
Ranking: 2/48


32.

Owen, D.J., D
avis, C.B., Hartnell, R.D., Madge, P.D., Thomson, R.J., Chong, A.K.,
Coppel,
R.L.
, and Itzstein, M.V.,
Synthesis and evaluation of galactofuranosyl N,N
-
dialkyl
sulfenamides and sulfonamides as antimycobacterial agents.

Bioorg Med Chem Lett, 2007.
17
(8): p.

2274
-
2277.


Category: Chemistry, Medicinal
Impact Factor: 2.538
Ranking: 11/35


33.

Pei, X., Guo, X.,
Coppel, R.
, Bhattacharjee, S., Haldar, K., Gratzer, W., Mohandas, N.,
and An, X.,
The ring
-
infected erythrocyte surface antigen (RESA) of plasmodium
fa
lciparum stabilizes spectrin tetramers and suppresses further invasion.

Blood, 2007.
110
(3): p. 1036
-
1042.


Category: Hematology
Impact Factor: 10.370
Ranking: 2/61


34.

Pei, X., Guo, X.,
Coppel, R.
, Mohandas, N., and An, X.,
Plasmodium falciparum
erythr
ocyte protein 3 (PfEMP3) destabilizes erythrocyte membrane skeleton.

J Biol Chem,
2007.
E
-
Pub
.


Category: Biochemistry & Molecular Biology
Impact Factor: 5.808
Ranking: 39/262


35.

Proellocks, N.I.
,
Kovacevic, S.
, Ferguson, D.J.,
Kats, L.M.
,
Morahan, B.J
.
,
Black,
C.G.
,
Waller, K.L.
, and
Coppel, R.L.
,
Plasmodium falciparum Pf34, a novel GPI
-
anchored
rhoptry protein found in detergent
-
resistant microdomains.

Int J Parasitol, 2007.
37
(11):
p. 1233
-
1241.


Category: Parasitology
Impact Factor: 3.337
Ranking:

4/23


36.

Pryor, M.J., Rawlinson, S.M.,
Butcher, R.E.
, Barton, C.L., Waterhouse, T.A., Vasudevan,
S.G., Bardin, P.G.,
Wright, P.J.
, Jans, D.A., and Davidson, A.D.,
Nuclear localization of
dengue virus nonstructural protein 5 through its importin alpha/bet
a
-
recognized nuclear
localization sequences is integral to viral infection.

Traffic, 2007.
8
(7): p. 795
-
807.


Category: Cell Biology
Impact Factor: 6.612

Ranking: 28/156


37.

Pryor, M.J., Rawlinson, S.M.,
Wright, P.J.
, and Jans, D.A.,
CRM1
-
dependent nucl
ear
export of dengue virus type 2 NS5
. Novartis Found Symp. Vol. 277. 2006, Chichester,
England, UK: John Wiley & Sons Ltd. 149
-
61; discussion 161
-
3, 251
-
3.


38.

Sansom, F.M.
,
Newton, H.J.
, Crikis, S., Cianciotto, N.P., Cowan, P.J., d'Apice, A.J., and
Hart
land, E.L.
,
A bacterial ecto
-
triphosphate diphosphohydrolase similar to human CD39
is essential for intracellular multiplication of Legionella pneumophila.

Cell Microbiol, 2007.
9
(8): p. 1922
-
1935.


Category: Cell Biology
Impact Factor: 5.070
Ranking: 36
/156


39.

Stinear, T.P.
,
Seemann, T.
,
Pidot, S.
, Frigui, W., Reysset, G., Garnier, T., Meurice, G.,
Simon, D., Bouchier, C., Ma, L., Tichit, M.,
Porter, J.L.
,
Ryan, J.
, Johnson, P.D.,
Davies,
J.K.
,
Jenkin, G.A.
, Small, P.L., Jones, L.M., Tekaia, F., Laval,

F., Daffe, M., Parkhill, J.,
and Cole, S.T.,
Reductive evolution and niche adaptation inferred from the genome of
Mycobacterium ulcerans, the causative agent of Buruli ulcer.

Genome Res, 2007.
17
(2):
p. 192
-
200.


Category: Biotechnology & Applied Microbio
logy
Impact Factor: 10.256
Ranking:
4/140


40.

Symes, S.J.
,
Gunesekere, I.C.
, Marshall, J.A., and
Wright, P.J.
,
Norovirus mixed
infection in an oyster
-
associated outbreak: an opportunity for recombination.

Arch Virol,
2007.
152
(6): p. 1075
-
1086.


Categor
y: Virology
Impact Factor: 1.850
Ranking: 20/23


41.

Waller, K.L.
,
Stubberfield, L.M.
,
Dubljevic, V.
, Nunomura, W., An, X., Mason, A.J.,
Mohandas, N.,
Cooke, B.M.
, and
Coppel, R.L.
,
Interactions of Plasmodium falciparum
erythrocyte membrane protein 3 wit
h the red blood cell membrane skeleton.

Biochim
Biophys Acta, 2007.
E
-
Pub
.


Category: Biophysics
Impact Factor: 3.587
Ranking: 14/66


42.

Wangroongsarb, P., Chanket, T., Gunlabun, K., Long, D.H., Satheanmethakul, P.,
Jetanadee, S., Thaipadungpanit, J.,
Wuthiekanun, V., Peacock, S.J., Blacksell, S.D.,
Smythe, L.D.,
Bulach, D.M.
, and Kalambaheti, T.,
Molecular typing of Leptospira spp.
based on putative O
-
antigen polymerase gene (wzy), the benefit over 16S rRNA gene
sequence.

FEMS Microbiol Lett, 2007.
271
(2): p. 170
-
179.


Category: Microbiology
Impact Factor: 2.068
Ranking: 51/88


43.

Whitchurch, C.B.
,
Complexity in '2
-
component' signal transduction systems.

Micro Aust,
2006.
27
: p. 128
-
131.


Category: Not Listed in ISI
Impact Factor: Not Listed in ISI


Ranking: Not Listed in ISI


44.

Whitchurch, C.B.
,
Biogenesis and function of type IV pili in Pseudomonas species
, in
Pseudomonas
, J.
-
L.R.a.R. Levesque, Editor. 2006, Springer: The Netherlands. p. 139
-
188.


45.

Yip, M.J.
,
Porter, J.L.
, Fyfe, J.A., Lavender
, C.J., Portaels, F., Rhodes, M., Kator, H.,
Colorni, A.,
Jenkin, G.A.
, and
Stinear, T.
,
Evolution of Mycobacterium ulcerans and other
mycolactone
-
producing mycobacteria from a common Mycobacterium marinum progenitor.

J Bacteriol, 2007.
189
(5): p. 2021
-
9.


Category: Microbiology
Impact Factor: 3.993
Ranking: 16/88