Program - Institut Pasteur

peaceevenΒιοτεχνολογία

4 Οκτ 2013 (πριν από 4 χρόνια και 8 μέρες)

155 εμφανίσεις

Bioinformatics and Genome Data Analysis


Fredj Tekaia

Institut Pasteur


tekaia@pasteur.fr

Bioinformatics and Genome Data Analysis

This advanced course aims at bringing
multidisciplinary scientists around :


a)
What we learned from completely sequenced
genomes.


(Conferences: 1/2 time)


b)

Algorithms used in sequence and genome
analysis


(Lectures (1/4) and practical sessions (1/4))
.

Day

1
:

Thursday

-

March

24

:

09

-

12
:

Introduction

to

Unix

and

perl

programming

Fredj

Tekaia

-

Institut

Pasteur

Paris


14

-

18
:

Introduction

to

Useful

Algorithms

and

multivariate

analysis

methods
.

Ahmed

Rebai

-

Biotechnology

Center

Sfax


Day

2
:

Friday

-

March

25
:

09

-

12

:

Introduction

to

Molecular

Biology

data

Odile

Kalogeropoulos



Institut

Pasteur

Paris



14

-

18
:

Introduction

to

WEB

resources

in

Bioinformatics

and

Genomes
.

Marie
-
Paule

Lefranc



Montpellier

II

University

Day

3
:

Saturday

-

March

26
:

09

-

11
:

conference

:


“Genome

annotation

:

What

can

we

learn

in

bacterial

biochemical

reactions

?”

Georges

Cohen



Institut

Pasteur

Paris


11
H
30



13
H

:

conference

:


“The

human

genome

:

impact

in

the

biomedical

domain”

.

Sonia

Abdelhak



Institut

Pasteur

Tunis



Day

4
:

Sunday

-

March

27

:


Social

program
:

visit

to

ElDjem

-



Day

5
:

Monday

-

March

28

:

9
H



12
H

:

conference
:


“How

eukaryotic

genomes

evolve
:

the

Yeast

example”
.

Bernard

Dujon

-

Institut

Pasteur

Paris


14
H

-

18
H

:

Theoretical

and

practical

session

:

Substitution

matrices



Algorithms

for

sequence

comparisons

;

Ahmed

Rebai

-

Fredj

Tekaia


Day

6
:

Tuesday

-

March

29
:

9
H



12
H

:

conference

:

«

Genomes

of

bacterial

pathogenes

and

their

diversity

»
.

Philippe

Glaser



Institut

Pasteur

Paris


14

-

18

:

Practical

session
:

Large

scale

proteome

comparisons
.


Fredj

Tekaia

-

Ahmed

Rebai

Day

7
:

Wednesday

-

March

30

:

9
H



13
H

:

Conference

:

«

Principles

and

methods

for

the

analysis

of

genes

and

genomes

sequences

»
.

Edouard

Yeramian



Institut

Pasteur

Paris


14

-

18

:

Motif

detection

-

Multiple

alignment
.


Ahmed

Rebai

-

Fredj

Tekaia


Day

8
:

Thursday

-

March

31
:

9
H



10
H
30

:

Conference

:

«

Transcriptional

profiling

of

the

hypha
-
to
-
yeast

transition

of

the

pathogenic

fungus

Paracoccidioides

brasiliensis

»

Gustavo

H
.

Goldman

-

Universidade

de

Sao

Paulo,

Brazil


11
H
-

12
H
30

«Large

scale

proteome

comparisons»
.

Fredj

Tekaia

14

-

18

:

«

Molecular

evolution

and

Phylogeny

»
.


Fredj

Tekaia

-

Ahmed

Rebai


Day

9
:

Friday

-

April

1
st

:

9
H
-
12
H

:

conference

:


«

Genome

organization

and

genome

evolution

»
.

Georgio

Bernardi

-

Stazione

Zoologica

Anton

Dohrn



Napoli,

Italy


14

-

18
H
:

«

Molecular

Evolution

and

Phylogeny

»


Fredj

Tekaia

-

Ahmed

Rebai


Day

10
:

Saturday

-

April

2

:

09
H



12
H

:

conference

:


«

Introduction

to

Structural

Bioinformatics

»
.

Michael

Nilges



Institut

Pasteur

Paris


14

-

16
H

:

Course

evaluation

and

end
.

Acknowledgements:


The

Institut

Pasteur

Paris

(http
:
//www
.
pasteur
.
fr)

Direction

des

Affaires

Internationales


(Mme

Michèle

Boccoz,

Dr

Jean
-
Luc

Guesdon

and

Mme

Leclerc)
.




ICGEB

(
http
:
//www
.
icgeb
.
trieste
.
it/)

Decio

Ripandelli,

Director,

Administration

and

External

Relations



EMBO

(http
:
//www
.
embo
.
org/projects/world/)

Mary

Gannon
,

Programme

Manager

Kathy

Oswald

EMBO

Courses

and

Workshops



IUBMB

(International

Union

of

Biochemistry

and

Molecular

Biology)

(http
:
//www
.
iubmb
.
unibe
.
ch/)

Prof
.

Mary

Osborn
,

President

IUBMB

Max

Planck

Institute

for

biophysical

Chemistry,

Göttingen,Germany
.

Prof
.

Jan

Joep

de

Pont
,

Treasurer

Radboud

University

Nijmegen,

The

Netherlands
.



ICRO

(
International

Cell

Research

Organization)

(
http
:
//www
.
unesco
.
org/ngo/icro/)

Prof
.

Georges

Cohen,

Institut

Pasteur

Paris

Mme

Claudine

SCULLINO


Marie
-
Paule LEFRANC

(
lefranc@ligm.igh.cnrs.fr
)

Université Montpellier II

IMGT, the international ImMunoGeneTics informationsystem®
http://imgt.cines.fr


Georgio Bernardi

(
bernardi@szn.it)

Stazione Zoologica Anton Dohrn; Villa Comunale8012, Napoli; Italy


Sonia Abdelhak

(
sonia.abdelhak@pasteur.rns.tn
)

Institut Pasteur Tunis, Tunisia


Ahmed Rebai

(
ahmed.rebai@cbs.rnrt.tn
)

Centre de Biotechnologie Sfax, Tunisia



Gorges

Cohen

(
gncohen@pasteur
.
fr
)


Bernard

Dujon

(

bdujon@pasteur
.
fr
)


Odile

Kalogeropoulos

(
odozier@pasteur
.
fr
)


Philppe

Glaser

(glaser@pasteur
.
fr)


Michael

Nilges

(
nilges@pasteur
.
fr
)


Edouard

Yeramian

(yeramian@pasteur
.
fr)


Fredj

Tekaia

(
tekaia@pasteur
.
fr
)

Institut

Pasteur

Paris


Gustavo

Goldman

(
ggoldman@usp
.
br)

Universidade de São Paulo, Ribeirão Preto, Brazil

Hamed Ben Dhia (President of the University)

Ali Gargouri (Discussions and comments along the talks)