Publications, Cumulative Scholars 2010 - ciser - Texas Tech University

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CUMULATIVE BIBLIOGRAPHY

PUBLICATIONS WITH UNDERGRADUATE STUDENT AUTHORS

(TTU/HHMI and NSF
-
REU Fellows in bold.)


Alatoom, A.A.,
Ricardo Aburto,

A.N. Hamood, J.A. Colmer
-
Hamood. 2007. VceR negatively
regulates the
vce
CAB MDR efflux operon

and positively regulates its own synthesis in
Vibrio cholerae

569B.
Canadian Journal of Microbiology.



Amor, Y., C.H. Haigler,
Sarah Johnson
,
Melody Wainscott
, and D.P. Delmer. 1995. A
membrane
-
associated form of sucrose synthase and its potential role i
n synthesis of
cellulose and callose in plants
. Proceedings of the National Academy of Sciences USA

92
:
9353
-
9357.


Babb, Michelle V
. and C.H. Haigler. 2001.
Sucrose phosphate synthase activity rises in
correlation with high
-
rate cellulose synthesis in three heterotrophic systems.
Plant
Physiology

127
: 1234
-
1242.



Baker, R. J., V. A. Taddei,
Jeremy L. Hudgeons
, and
R. A. Van Den Bussche. 1994. Systematic
relationships within
Chiroderma

(Chiroptera: Phyllostomidae) based on cytochrome
b
sequence variation.
Journal of Mammalogy
75
: 321
-
327.


Baker, R.J., M.J. Hamilton, R.A. Van Den Bussche,
Lara E. Wiggins
, D.W. Sugg, M.H. Smith,
M.D. Lomakin, S.P. Gaschak, E.G. Bundova, G.A. Rudenskaya, and R.K. Chesser. 1996.
Small mammals from the most radioactive sites near the Chornoby
l nuclear power plant.
Journal of Mammalogy

77
: 155
-
170.


Baker, R.J., R.A. Van Den Bussche,
Amanda J. Wright
,
Lara E. Wiggins
, M.J. Hamilton, E.P.
Reat, M.H. Smith, M.D. Lomakin, and R.K. Chesser. 1996. High le
vels of genetic change
in rodents of Chornobyl.
Nature

380
: 707
-
708. See also
Nature

390
: 100 (1997).


Baker, R.J.,
Amy M. Bickham
, M. Bondarkov, S.P. Gaschak
, C.W. Matson, B.E. Rodgers, J.K.
Wickliffe, and R.K. Chesser. 2001. Consequences of polluted environments on population
structure: the bank vole (
Clethrionomys glareolus
) at Chornobyl.
Ecotoxicology

10
: 211
-
216.



Bartsch, R.A., L.P. Bitalac,
Charles L. Cowey
, S. Elshani, M
-
J Goo, V.J. Huger, S.N. Ivy, Y.
Jang, R.J. Johnson, J.S. Kim, E. Luboch, J.A. McDonough, M.J. Pugia, B. Son, and Q.
Zhao. 2000. Lariat ether alcohols based on dibenzo
-
16
-
crown
-
15.
Journal of

Heterocyclic
Chemistry
37
: 1337
-
1350.



Bartsch, R.A.,
Charles L. Cowey
, S. Elshani, M
-
J Goo, V.J. Huber, S.N. Ivy, R.J. Johnson, J.S.
Kim, E. Luboch, J.A. McDonough, M.J. Pugia, B. Son, and Q. Zhao. 2001. Syn
thesis of
lariat ether carboxylic acids based on dibenzo
-
16
-
crown
-
5.
Journal of Heterocyclic
Chemistry

38
: 311
-
331.



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Bell, Darin M
., M.J. Hamilton, C.W. Edwards,
Laura E. Wiggins
, R.M. Martinez, R.E. Strauss,
R.D. Bradley, and R.J. Baker. 2001. Patterns of karyptypic megaevolution in
Reithrodontomys
: evidence from a cytochrome
-
b

phylogenetic hypothesis.
Journal of
Mammalogy

82
(I): 81
-
91.



Bessire, David R
. and E. L.

Quitevis. 1994. Effect of temperature and viscosity on rotational
diffusion of merocyanine 540 in polar solvents
. Journal of Physical Chemistry

98
: 13083
-
13092.


Bornhop, Darryl J., Darren S. Hubbard, Michael P.

Houlne, and
Chris Adair
. 1999.
FluorescentTissue Site
-
Selective lanthanide Chelate, Tb
-
PCTMB for Enhanced Imaging of
Cancer.
Analytical Chemistry
71
: 2607
-
2615.


Bradley, R.D.,
Roslyn Martinez
, M. Maltbie, I. T
iemann
-
Boege, H.A. Wichman, and R.J.Baker.
2003. Rapidly evolving repetitive DNA in a karyotypically megaevolved genome: factors
that affect chromosomal evolution.
Occasional Papers, Museum of Texas Tech University
:
223
.


Brausch, J.M., B.R. Blackwell, B.N. Beall,
Cynthia Caudillo
, V. Kolli, C. Godard
-
Codding,
S.B. Cox, G. Cobb, and P.N. Smith. 2010. Effects of polycyclic aromatic hydrocarbons in
Northern Bobwhite Quail (
Colinus virginianus
).
Journal of
Toxicology and Environmental
Health
, Part A,
73
: 540
-
551.


Brown, R.W., C. Gonzales, M.J. Hooper,
Andrew C. Bayat
,
Ashley M. Fornerette
, T.J.
McBride, T. Longoria, and H.W. Mielke. 2008. Soil lead (Pb
) in residential transects
through Lubbock, Texas: a preliminary assessment.
Environmental Geochemistry and
Health.
10.1007/s10653
-
008
-
9180
-
y



Cain, W.C.,
Rodney W. Stuart
, D.L. Lefkowitz, J.D. Starnes, S. Margolin, and S.S. Lefkowitz.
1998. Inhibition of

tumor necrosis factor and subsequent endotoxin shock by pirfenidone.
International Journal of Immunopharmacology

20
: 685
-
695.


Cañas, Jaclyn E.
, and T. Anderson. 2002. Organochlorine contaminants in eggs: the i
nfluence
of contaminated nest material.
Chemosphere

47
: 585
-
589.



Carr, J. A. and
Kimberly J. Gregg
. 1995. Opioid peptide inhibition of endogenous
norepinephrine release from the A2 noradrenergic cell group in
vitro.
Neuropeptides

28
:
219
-
225.


Carr, J.A., A. M Carpenter, M.M. D'Souza,
Amy R. Elmore
, A.T. Lovering, and C.E. Reigel.
1998. Alterations in brain and pituitary

-
endorphin content in genetically epilepsy
-
pro
ne
rats.
Epilepsy Research

31
: 113
-
122


Collie, N.L., Z. Zhu,
Shana Jordan
, and J.R. Reeve, Jr. 1997. Oxyntomodulin stimulates
intestinal glucose uptake i
n rats.
Gastroenterology

112
: 1961
-
1970.


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3
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Cowden, Karen D.
, and M.C. Simon. 2002. The bHLH/PAS factor MOP3 does not participate
in hypoxia responses.
Biochemical and Biophysical Research Communications

290
:
1228
-
1236.


Craig, Crystal. N.
, B.A. Reece, and N.E. Mcintyre. 2008. Nestedness in playa odonates as a
function of area and surrounding land
-
use.
Wetlands.
Vol 28
,
No. 4
: 995
-
1003.


DeLeon, Katrina
, F. Balldin, C. Watters, A. Hamood, J. Griswold, S. Sreedharan, and K.
Rumbaugh. 2009. Gallium maltolate treatment eradicates
Pseudomonas aeruginosa

infection in thermally injured mice.
Antimicrobial Agents and
Chemotherapy.

Vol. 53, No.
4: 1331
-
1337.


Deslippe, R.J.,
Jesus R. Salazar
, and Y
-
J. Guo. 2001. A darkling beetle population in West
Texas during the 1997
-
1998 El Niño.
Journal of Arid Environments

49
: 711
-
721.



Donahue, L.M., D.R. Webster,
Ivvanee Martinez
, and D.C. Spray. 1998. Decreased gap
-
junctional communication associated with segregation of the neuronal phenotype in the
RT4 cell
-
line family.
Cell Tissue Researc
h

292
: 27
-
35.


Duarte, Xochitl
, C.T. Anderson, M. Grimson, R.D. Barabote, R.E. Strauss, L.S. Gollahon,
M.J.D. San Francisco. 2000.
Erwinia chrysanthemi

strains cause death of human
gastrointestinal cells in cult
ure and express an intimin
-
like protein.
FEMS Microbiology
Letters

190
: 81
-
86



Durish, Nevin D.
, K.E. Halcomb, C.W. Kilpatrick, and R.D. Bradley. 2004. Molecular
systematics of the
Peromyscus truei

species group
.
Journal of Mammalogy
85
: 1160
-
1169.


Genoways, H.H., M.J. Hamilton,
Darin M. Bell
, R.R. Chambers, and R.D. Bradley. 2008.
Hybrid zones, genetic isolation, and systematics of pocket gophers (genus
Geomys
) in
Nebraska
. Journal of Mammalogy

89
(4):826
-
836


Gonzalez, Zorisadday
, D.A. Ray, L.R. McAliley, M.J. Gray, C. Perchellet, L.M. Smith, and
L.D. Densmore. 2004. Five polymorphic microsatellite markers for the Great P
lains toad
,
Bufo cognatus. Molecular Ecology

Notes

4
: 9
-
10.


Gribenko, A., M.M. Lopez,
John M. Richardson III
, and G.I. Makhatadze. 1998. Cloning,
overexpression, purification, and spectroscopic characterizatio
n of human S100P.
Protein
Science

7
: 211
-
215.


Hamilton, D.E., and
Crystal N. Craig
. 2008. Incident of temporary burrow appropriation by a
checkered garter snake,
Thamnophis marcianus
, from a North American tarantula
Aphonopelma hollyi
.
Southwestern Entomologist

Vol. 33, No. 4.




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4
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Haseloff, B.J., T.L. Freeman, V. Valmeekam, M.W. Melkus, F. Oner,
Michael S. Valachovic
,
and M.J.D.. San Francisc
o. 1998. The
exuT

gene of
Erwinia chrysanthemi

EC16:
nucleotide sequence, expression, localization, and relevance of the gene product.
Molecular
Plant
-
Microbe Interactions

11
: 270
-
276.


Hayward, Amanda L.,
Cruz A
. Hinojos
, Barbara Nurowska, Aveline Hewetson, Sandra
Sabatini, Peter J. Oefner, and Peter A. Doris. 1999. Altered solium pump alpha and gamma
subunit gene expression in nephron segments for hypertensive rats.
Journal of
Hypertension
17
: 1081
-
1087.


Held, L. I.,
Michael A. Heup
, J. M. Sappington, and S. D. Peters. 1994. Interactions of
decapentaplegic
,
wingless
, and
Distal
-
less

in the
Drosophila

leg
. Roux's Archives in
Developmental Biology

203
: 310
-
319.


Held, L.I. and
Michael A. Heup
. 1996. Genetic mosaic analysis of
decapentaplegic

and
wingless

gene function in the
Drosophila

leg.
Development, Genes, and Evo
lution

206
:
180
-
194.


Henderson, C.W.,
Cindy A. Johnson
,
Sundus A. Lodhi
, and S.L. Bilimoria. 2001. Replication
of
Chilo

iridescent virus in the cotton boll weevil,
Anthonomus grandis
, and development
of an infec
tivity assay.
Archives of Virology

146
: 767
-
775.



Hernandez, Kyle M.
, B.A. Reece, and N.E. McIntyre. Effects of anthropogenic land use on
Odonata in playas of the southern high plains.
Western North American N
aturalist
:
66
(3):273
-
278m 2006,


Hirasawa, M., L.M. Rubio,
Jeannie L. Griffin
, E. flores, An. Herrero, J. Li, S
-
K Kim, J.K.
Hurley, G. Tollin, and D.B. Knaff. 2004. Complex formation between ferredoxin and
Synec
hococcus

ferredoxin:nitrate oxidoreductase.
Biochimica et Biophysica Acta

1608
:
155
-
162.


Hubbard, D.S., M.P. Houlne, G. Kiefer, H.F. Janssen,
Callenda Hacker
, and D.J. Bornhop.

1998. Diagnostic Imaging Using Rare
-
Earth Chelates.
Lasers in Medical Science

13
:14
-
21.


Hudgeons, Jeremy L.
, A.E. Knutson, C.J. DeLoach, K.M. Heinz, W.A. McGinty, and J.L.
Tracy.
2007 Establishment and biological success of
Diorhabda elongata elongata

on
invasive
Tamarix

in Texas.
Southwestern Entomologist
Volume
32

No. 3: 157
-
168.


Hulbert, Lindsey E.
, and J.J. McGlone. 2006. Evaluation
of drop versus tricle
-
feeding systems
for crated or group
-
penned gestating sows.
Journal of Animal Science

84
: 1004
-
1014.


Jackson, R.C.,
Ngan Ngo
, and Hao Ngo. 2002. Chromosome
-
specific desynapsis in the
N

= 2

race of
Haplopappus gracilis

(Compositae).
American Journal of Botany

89
(5): 777
-
782.



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5
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Kang, Songsu, B.M. Berkshire, Z. Xue, M. Gupta,
Christianah Layode
, P.A. May, and M.F.
Mayer. 2008. Polypseudorotaxanes v
ia ring
-
opening metathesis polymerizations of
[2]Catenanes.
Journal of the American Chemical Society
. Published online 22 October
2008.


Kennedy, R.C., M.H. Shearerr,
Devin B. Lowe
, C.A. Jumper, M. Chiriva
-
Intern
ati, and R.K.
Bright. 2004. Anti
-
idiotype responses abrogate anti
-
CD4
-
induced tolerance to a tumor
-
specific antigen and p
romote systemic tumor immunity.
Cancer

Immunology,

Immunotherapy

10.1007/s00262
-
004
-
0547
-
3. Published online 19 May 2004.


Khan, S.A., E. Matysiak
-
Zablocki, R. Ball, A. Krtolica,
Gretchen Hawkins
, M. Ghahremani,
J.W. Ludlow, and J. Dorrington. 1997. Steroidogenesis
-
inducing protein, isolated from
human ovarian follicular fluid, is a potent mit
ogen for cell lines derived from ovarian
surface epithelial carcinomas.
Gynecologic Oncology

66
: 501
-
508.


Kim, J. Matt
,
Jennifer T. McGaughy
,
R. Kent Bogle
, and S.E. Ravnik. 2001. Meiotic
expression of the cyc
lin H/Cdk7 complex in male germ cells of the mouse.
Biology of
Reproduction

64
: 1400
-
1408.



Kim, S.K., C.L. Sims,
Susan E. Wozniak
, S.H. Drude, D. Whitson, and R.W. Shaw.

2009.
Antibiotic resistance in bacteria: Novel metalloenzyme inhibitors.
Chemical Biology and
Drug Design

74
: 343
-
348.


Kim, S.W.,
Lindsey E. Hulbert
, H.A. Rachuonyo, and J.J. McGlone. 2004. Relative availabilit
y

of iron in mined humic substances for weanling pigs.
Asian
-
Australian Journal of Animal
Science.

Volume 17, No. 9: 1266
-
1270.


Kim, Y., A.M. Carpenter,
Kimberly J. Gregg
, Z. Shahnaz, and J.A. Carr. 1995. Diurn
al

variationin

-
melanocyte
-
stimulating hormone content of various brain regions and plasma
of the Texas toad,
Bufo speciosus
.
General and Comparative Endocrinology

98
: 50
-
56.


Leake, James L.
, S.E. Dowd, R.D. W
olcott, A.M. Zischkau, and Y. Sun. 2009. Identification of
yeast in chronic wounds using new pathogen
-
detection technologies.
Journal of Wound

Care
, Volume 18, No. 3, pp103
-
108.


Lee, V.H., A.B. Lee,
Elizabeth B.

Phillips
,
Justin K. Roberts
, and H.M. Weitlauf. 1998.
Spatio
-
temporal pattern for expression of galectin
-
3 in the murine utero
-
placental complex:
evidence for differential regulation.
Biology of Reproduction

58
: 1277
-
1282.


Lefkowitz, D.L., J.A. Lincoln, K.R. Howard,
Rodney Stuart
, S.S. Lefkowitz, and R.C. Allen.
1997. Macrophage
-
mediated candidicidal activity is augmented by exposure to eosinophil
peroxidase: A paradi
gm for eosinophil
-
macrophage interaction.
Inflammation

21
: 159
-
172




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Lemaire, S.D.,
John M. Richardson
, A. Goyer, E. Keryer, J.M. Lancelin, G.I. Makhatadze,
J.P.Jacquot. 2000. Primary structure determinants of the pH
-

and temperature
-
dependent
aggregation of thioredoxin.
Biochimica et Biochysica Acta

1476
: 311
-
323.


Lewis, J.D.,
Laura A. Payton
, J.G. Whitford, J.A
. Byrne, D.I. Smith, L. Yang, and R.K. Bright.
2007. Induction of tumorigenesis and metastasis by the murine orthologue of tumor protein
D52.
Molecular Cancer Research 2007
; 5(2): 133
-
144.



Lewis, J.D.,
Laura A
. Sullivan
, J.A. Byrne, W. de Riese, and R.K. Bright. 2009. Memory and
cellular immunity induced by a DNA vaccine encoding self antigen TPD52 administered
with soluble GM
-
CSF.

Cancer Immunol Iuununother
. Published on
-
line DOI
10.1007/s00262
-
009
-
0659
-
x


Li, W., M. Lyte, F. Freestone,
Aziba Ajmal
, J.A. Colmer
-
Hamood, and A.N. Hamood. 2009
Norepinephrine represses the expression of
toxA

and the siderophore genes in
Pseudomonas aeruginosa
.
FEMS Microbiology
Lettters
. Published on
-
line DOI:
10:1111/j.1574
-
6968.2009.01739x.


Lowe, Devin B.
, M.H. Shearer,
James A. Tarbox
, H.S. Kang, C.A. Jumper, R.K. Bright, R.C.
Kennedy. 2004. In vitro simian virus 40 large tumor anti
gen expression correlates with
differential immune responses following DNA immunization.
Virology

332
: 28
-
37



Mansouri, Bobbak
,
William M. Henne
, S.K. Oomman, R. Bliss,
Jennifer Attridge
, V.
Finckbone, T. Zeito
uni,
Trent Hoffman
, B.A. Bahr, H.K. Strahlendorf, J.C. Strahlendorf.
2007. Involvement of calpain in AMPA
-
induced toxicity to rat cerebellar Purkinje neurons.
European Journal of Pharmacology

557
: 106
-
114.



Mel
ton, C.M., G.M. Zaunbrecher, G. Yoshizaki, R. Patino, S. Whisnant,
Alexia Rendon
, and
V.H. Lee. 2001. Expression of connexin 43 mRNA and protein in developing follicles of
prepubertal procine ovaries.
Comparative Biochemistry and Physiology Part B

130
: 43
-
55.



McGinley, M.A., S.S. Dhillion, and
Joan C. Neumann
. 1994. Environmental heterogeneity and
seedling establishment: ant
-
plant
-
microbe interactions.
Functional Ecology
8
: 607
-
615.



McMahon, K. K., K.J. Piron,
Van T. Ha
, and A. T. Fullerton. 1993. Developmental and
biochemical characteristics of the cardiac membrane
-
bound arginine
-
specific mono
-
ADP
-
ribosyltransferase.
The Biochemical Journal
293
: 789
-
793.


Miersma, Nick A.
, C.B. Pepper, and T.A. Anderson. 2003. Organochlorine pesticides in
elementary school yards along the Texas
-
Mexico border.
Environmental Pollution
126
: 65
-
71.


Millena, A.C.,
Sheila C. Reddy
,
Gretchen H. Bowling
, and S.A. Khan. 2004. Autocrine
regulation of
function of Leydig cells by transforming growth factor
-

.
Molecular and
Cellular Endocrinology

224
: 29
-
39.


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7
--

Nes, W.D., B.S. McCourt, W. Zhou, J. Ma, J.A. Marshall, L.
-
A. Peek, and
Michael Brennan
.
::1998. Overexpression, purification, and stereochemical studies of the recombinant (S)
-
adenosyl
-
L
-
methionine:

24(25)
-
to

24(28)
-
sterol methyl transferase e
nzyme from
Saccharomyces cerevisiae
.
Archives of Biochemistry and Biophysics

353
: 297
-
311.


Oomman, S., V. Finckbone, J. Dertien,
Jennifer Attridge
,
William Henne
,
Margarita Medina
,
Bobbak Mansouri
, H. Singh, H.

Strahlendorf, and J. Strahlendorf. 2004. Active caspase
-
3
expression during postnatal development of rat cerebellum is not systematically or
consistently associated with apoptosis.
The Journal of Comparative Neurology

476
: 154
-
173.


Pan, X., M.J. San Francisco, C. Lee,
Kelly M. Ochoa
, X. Xu, J. Liu, B. Zhang, S.B. Cox, and
G.P. Cobb. 2007. Examination of the mutagenicity of RDX and it’s
N
-
nitroso metabolites
using the
Salmonella

reverse mutation assay.
Mutation

Research

629
: 64
-
69.


Payton, Laura A.
, J.D. Lewis, J.A. Byrne, and R.K. Bright. 2008. Vaccination with

metastasis
-
related tumor associated antigen TPD52 and CpG/ODN induces protective
tumor immunity.
Cancer
Immunology, Immunotherapy
. Volume
57
, No. 6 (june)


Peppers, J.A.,
Lara E. Wiggins
, and R.J. Baker. 1997. Nature of B chromosomes in the harvest
mouse Reithrodontomys megalotis by fluorescence
in situ

hybridization (FISH).
Chromosome Research

5
: 475
-
479.


Peppers, Lottie L
.,
Darin M. Bell
, J.C. Cathey, T.W. Jolley,
Roslyn Martinez
, C.W. Matson,
A.Y. Nekrutenko, and R.D. Bradley. 1998. Distributional records of mammals in Texas.
Occasional Papers Museum of Texas T
ech University

Number 183. 5 pages.


Peppers, Lottie L.
, D.S. Carroll, and R.D. Bradley. 2002. Molecular systematics of the genus
Sigmodon

(Rodentia: Muridae): evidence from the mitochondrial cytochrone
-
b

gene.
Journal of Mammalogy

83
: 396
-
407


Phillips, Brooke
, K. Knisley, K.D. Weitlauf, J. Dorsett, V. Lee, and H. Weitlauf. 1996.
Differential expression of two ß
-
galactoside
-
binding lectins in the reproductive tracts
of
pregnant mice.
Biology of Reproduction

55
: 548
-
558.


Rendon, Alexia
, A. Hewetson, B.S. Chilton, and V.H. Lee. 2000. Expression of RUSH
transcription factors in developing and adult rabbit gonads.
Biology of Re
productin
63
:156
-
164.



Richardson, John M.
,
K. Wyatt McMahon
, Clinton C. MacDonald, and George I.
Makhatadze. 1999. MEARA Sequence Repeat of human CstF
-
64 Polyadenylation Factor is
Helical in Solution. A Spectr
oscopic and Calorimetric Study.
Biochemistry

38
: 12869
-
12875.


Robbins, Sharon
, Z. Xiang, and E. B. Peffley. 1997. Transient expression of green fluorescent
protein in
Allium
.
Allium Newsletter

6
: 8
-
10.

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8
--


Roberts, H.R., T.W. Jolley,
Lottie L. Peppers
, J.C. Cathey,
Rosyln Martinez
, J.A. Peppers,
A.L. Bates, and R.D. Bradley. 1997. Notworthy records of small mammals in Texas.
Occasional Papers Museum of
Texas Tech University
, Number 172.


Roxas, V.P.,
Roger K. Smith, Jr.
, E.R. Allen, and R.D. Allen. 1997. Overexpression of
glutathione S
-
transferase/glutathione peroxidase enhances the growth of transgenic tobacc
o
seedlings during stress.
Nature Biotechnology

15
: 988
-
991.


Rudine, Anthony C.
, M.A. Sutherland,
Lindsay Hulbert
, J.L. Morrow, and J.J. McGlone.
2007. Diverse production system and social status effects on pig
immunity and behavior.
Livestock Science

111
: 86
-
95.


Schaber, J.A., N.L. Carty,
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